RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 B4GAT1O43505 415 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ECEL1O95672 775 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 CPNE6O95741 557 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 TRBC1P01850 177 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 IVLP07476 585 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ZNF30P17039 623 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ITIH1P19827 911 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ALDH4A1P30038 563 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ADCY8P40145 1251 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 POLD2P49005 469 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 OR1D5P58170 312 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 CTBSQ01459 385 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 PDK2Q15119 407 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 IFI16Q16666 785 aaKnown RBP17.09■□□□□ 0.33
SMC4-226ENST00000497311 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
SMC4-226ENST00000497311 AMZ1Q400G9 498 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ANKRD20A8PQ5CZ79 823 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 PHF19Q5T6S3 580 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 DOK6Q6PKX4 331 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 SLC30A9Q6PML9 568 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 TMPRSS9Q7Z410 1059 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 SLITRK4Q8IW52 837 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMC4-226ENST00000497311 PTCD2Q8WV60 388 aaKnown RBP17.09■□□□□ 0.33
SMC4-226ENST00000497311 MAML1Q92585 1016 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ZNF670Q9BS34 389 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 ABCG8Q9H221 673 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 RBM22Q9NW64 420 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMC4-226ENST00000497311 CTTNBP2NLQ9P2B4 639 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 AMACRQ9UHK6 382 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 CD84Q9UIB8 345 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 SCN8AQ9UQD0 1980 aa17.09■□□□□ 0.33
SMC4-226ENST00000497311 MAP3K6O95382 1288 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 GYPCP04921 128 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 PYGLP06737 847 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 CCNCP24863 283 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 MAPK10P53779 464 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 DSC2Q02487 901 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 PTSQ03393 145 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 NR1D2Q14995 579 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 KIAA1614Q5VZ46 1190 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 ALG1LQ6GMV1 187 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 ADAMTSL4Q6UY14 1074 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 RFLNAQ6ZTI6 216 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 ZNF765Q7L2R6 523 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 ZNF438Q7Z4V0 828 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 NLRP8Q86W28 1048 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 MAP7D3Q8IWC1 876 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 FATE1Q969F0 183 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 SCARF2Q96GP6 870 aaPredicted RBP17.08■□□□□ 0.32
SMC4-226ENST00000497311 TSGA13Q96PP4 275 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 SMIM14Q96QK8 99 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 CDH19Q9H159 772 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 SEMA6CQ9H3T2 930 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 RDH14Q9HBH5 336 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 AKAP7Q9P0M2 348 aaPredicted RBP17.08■□□□□ 0.32
SMC4-226ENST00000497311 IFNKQ9P0W0 207 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 DNPEPQ9ULA0 475 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 TTLL3Q9Y4R7 772 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 COL6A6A6NMZ7 2263 aa17.08■□□□□ 0.32
SMC4-226ENST00000497311 PROSCO94903 275 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 SOD1P00441 154 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 H2AFZP0C0S5 128 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 LIPCP11150 499 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 CA4P22748 312 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 CASP14P31944 242 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 ETV5P41161 510 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 ACTR1BP42025 376 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 GPR3P46089 330 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 ACTR1AP61163 376 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 LY6DQ14210 128 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 TGIF1Q15583 401 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 CLPPQ16740 277 aaPredicted RBP17.07■□□□□ 0.32
SMC4-226ENST00000497311 USP53Q70EK8 1073 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 H2AFVQ71UI9 128 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 CPNE8Q86YQ8 564 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 NAGSQ8N159 534 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 PATE1Q8WXA2 126 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 USP7Q93009 1102 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 SCAMP4Q969E2 229 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 OR2M4Q96R27 311 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 TDRD1Q9BXT4 1180 aaKnown RBP17.07■□□□□ 0.32
SMC4-226ENST00000497311 SEPT10Q9P0V9 454 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 UVRAGQ9P2Y5 699 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 CHKBQ9Y259 395 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 TMEM98Q9Y2Y6 226 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 ST14Q9Y5Y6 855 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 CFAP46Q8IYW2 2715 aa17.07■□□□□ 0.32
SMC4-226ENST00000497311 ZNF462Q96JM2 2506 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 PRAMEF33A0A0G2JMD5 474 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 EFSO43281 561 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 PRAMEF10O60809 474 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 KRT7P08729 469 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 PLA2G2AP14555 144 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 MX2P20592 715 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 STC1P52823 247 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 IHHQ14623 411 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 ZFYVE27Q5T4F4 411 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 TMEM164Q5U3C3 297 aa17.06■□□□□ 0.32
SMC4-226ENST00000497311 NRSN1Q8IZ57 195 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms