RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 CD84Q9UIB8 345 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 PHTF1Q9UMS5 762 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 TMEM98Q9Y2Y6 226 aa12.29□□□□□ -0.44
SAMM50-205ENST00000493621 LRRK2Q5S007 2527 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 A0A0U1RQS6 177 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 A8MU76 341 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 LGALS16A8MUM7 142 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 B4E171 279 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 PSMD11O00231 422 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 NKX2-8O15522 239 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 PRKAR1AP10644 381 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 FERP16591 822 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 CTPS1P17812 591 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 CR2P20023 1033 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 TNFAIP3P21580 790 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 TEAD1P28347 426 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 MIPP30301 263 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 HSPA9P38646 679 aaKnown RBP12.28□□□□□ -0.44
SAMM50-205ENST00000493621 TSPAN7P41732 249 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 RAB15P59190 212 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 MAXP61244 160 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 GPLD1P80108 840 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 DPYSQ14117 519 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 SNAP47Q5SQN1 464 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 PLEKHA7Q6IQ23 1121 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 TMEM71Q6P5X7 295 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 RFLNAQ6ZTI6 216 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 MARK2Q7KZI7 788 aaKnown RBP12.28□□□□□ -0.44
SAMM50-205ENST00000493621 TRIM74Q86UV6 250 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 LZTR1Q8N653 840 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 ANKRD20A12PQ8NF67 263 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 FNIP1Q8TF40 1166 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 CATSPER2Q96P56 530 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 CTRCQ99895 268 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 TRIM7Q9C029 511 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 LIMA1Q9UHB6 759 aaKnown RBP12.28□□□□□ -0.44
SAMM50-205ENST00000493621 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 NBASA2RRP1 2371 aa12.28□□□□□ -0.44
SAMM50-205ENST00000493621 TMEM191CA6NGB0 347 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 DUX1O43812 170 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 PGLSO95336 258 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 PEX11BO96011 259 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 SOD1P00441 154 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 CCDC172P0C7W6 258 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 HCAR3P49019 387 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 DPTQ07507 201 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 UBAP2LQ14157 1087 aaKnown RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 IGFBP7Q16270 282 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 PYCR3Q53H96 274 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 ARMC12Q5T9G4 340 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 USP45Q70EL2 814 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 TECPR1Q7Z6L1 1165 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 PSTKQ8IV42 348 aaKnown RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 BBS5Q8N3I7 341 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 BMPERQ8N8U9 685 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 OR10G6Q8NH81 332 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 C9orf43Q8TAL5 461 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 SLC37A2Q8TED4 501 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 KIAA1143Q96AT1 154 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 SCRN2Q96FV2 425 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 SCARF2Q96GP6 870 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 SLC45A3Q96JT2 553 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 ERGIC2Q96RQ1 377 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 MCCC1Q96RQ3 725 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 SLC38A3Q99624 504 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 MGME1Q9BQP7 344 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 ABCG8Q9H221 673 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 ZWILCHQ9H900 591 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 GPN2Q9H9Y4 310 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 ZNF71Q9NQZ8 489 aaPredicted RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 ETNK2Q9NVF9 386 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 PILRAQ9UKJ1 303 aa12.27□□□□□ -0.45
SAMM50-205ENST00000493621 UTP20O75691 2785 aaKnown RBP12.27□□□□□ -0.45
SAMM50-205ENST00000493621 LOC101059948A0A1B0GTJ6 334 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 H3BRJ5 948 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 CAPN5O15484 640 aaPredicted RBP12.26□□□□□ -0.45
SAMM50-205ENST00000493621 MAFKO60675 156 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 LRCH4O75427 683 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 MAP3K6O95382 1288 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 EML2O95834 649 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 AMPD1P23109 780 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 CASRP41180 1078 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 FASLGP48023 281 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 ZNF135P52742 658 aaPredicted RBP12.26□□□□□ -0.45
SAMM50-205ENST00000493621 FOXK1P85037 733 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 CDC20Q12834 499 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 LRRC66Q68CR7 880 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 TMCO3Q6UWJ1 677 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 ADAMTSL4Q6UY14 1074 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 IRF2BP2Q7Z5L9 587 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 GALNT13Q8IUC8 556 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 UNC5BQ8IZJ1 945 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 NLGN4XQ8N0W4 816 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 SFRP1Q8N474 314 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 NLGN4YQ8NFZ3 816 aaPredicted RBP12.26□□□□□ -0.45
SAMM50-205ENST00000493621 NSMCE1Q8WV22 266 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 SCAMP4Q969E2 229 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 AP2M1Q96CW1 435 aa12.26□□□□□ -0.45
SAMM50-205ENST00000493621 RTP4Q96DX8 246 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms