RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TCP11X2Q5H9J9 407 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 DENND2CQ68D51 928 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 KDELC2Q7Z4H8 507 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 ARHGAP22Q7Z5H3 698 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 ARHGAP12Q8IWW6 846 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 CBARPQ8N350 705 aaPredicted RBP17.6■□□□□ 0.41
NUP50-218ENST00000493456 ZNF599Q96NL3 588 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 OR2M4Q96R27 311 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 VPS16Q9H269 839 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 LRRC4CQ9HCJ2 640 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 GOLGA6AQ9NYA3 693 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 AP4E1Q9UPM8 1137 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 DFFAO00273 331 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 STK17BO94768 372 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 TCN2P20062 427 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 HSPA9P38646 679 aaKnown RBP17.59■□□□□ 0.41
NUP50-218ENST00000493456 POLD2P49005 469 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 COPB1P53618 953 aaKnown RBP17.59■□□□□ 0.41
NUP50-218ENST00000493456 DPTQ07507 201 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 LRP8Q14114 963 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 MAP7Q14244 749 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 LBRQ14739 615 aaKnown RBP17.59■□□□□ 0.41
NUP50-218ENST00000493456 PPP1R15BQ5SWA1 713 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 TMCO4Q5TGY1 634 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 DCUN1D2Q6PH85 259 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 TIPARPQ7Z3E1 657 aaKnown RBP17.59■□□□□ 0.41
NUP50-218ENST00000493456 HSD11B1LQ7Z5J1 315 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 UNC5BQ8IZJ1 945 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 SFRP1Q8N474 314 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 LZTR1Q8N653 840 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 SLC37A2Q8TED4 501 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 NSMCE3Q96MG7 304 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 CTRCQ99895 268 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 PHTF1Q9UMS5 762 aa17.59■□□□□ 0.41
NUP50-218ENST00000493456 DAPK3O43293 454 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 LHCGRP22888 699 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 STAT5AP42229 794 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 UBE2HP62256 183 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 ZNF235Q14590 738 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 DPCR1Q3MIW9 517 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 DOK6Q6PKX4 331 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 ARHGAP36Q6ZRI8 547 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 RFX8Q6ZV50 586 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 PDCD6IPQ8WUM4 868 aaKnown RBP17.58■□□□□ 0.4
NUP50-218ENST00000493456 DHX35Q9H5Z1 703 aaKnown RBP17.58■□□□□ 0.4
NUP50-218ENST00000493456 STN1Q9H668 368 aaKnown RBP17.58■□□□□ 0.4
NUP50-218ENST00000493456 NLRC4Q9NPP4 1024 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 FAM207AQ9NSI2 230 aaPredicted RBP17.58■□□□□ 0.4
NUP50-218ENST00000493456 GPATCH2LQ9NWQ4 482 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 TP53TG5Q9Y2B4 290 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 PCDHGC4Q9Y5F7 938 aa17.58■□□□□ 0.4
NUP50-218ENST00000493456 SPTBN1Q01082 2364 aaKnown RBP17.58■□□□□ 0.4
NUP50-218ENST00000493456 DLGAP3O95886 979 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 ERCC2P18074 760 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 GPR1P46091 355 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 ZNF135P52742 658 aaPredicted RBP17.57■□□□□ 0.4
NUP50-218ENST00000493456 PYCR3Q53H96 274 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 SNAP47Q5SQN1 464 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.57■□□□□ 0.4
NUP50-218ENST00000493456 ADAMTSL4Q6UY14 1074 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 Q6ZVL8 140 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 GALNT13Q8IUC8 556 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 ESX1Q8N693 406 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 NPWQ8N729 165 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 MCCC1Q96RQ3 725 aaPredicted RBP17.57■□□□□ 0.4
NUP50-218ENST00000493456 NUDCD1Q96RS6 583 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 SARS2Q9NP81 518 aaKnown RBP17.57■□□□□ 0.4
NUP50-218ENST00000493456 SAMSN1Q9NSI8 373 aaKnown RBP17.57■□□□□ 0.4
NUP50-218ENST00000493456 SEPT11Q9NVA2 429 aaKnown RBP17.57■□□□□ 0.4
NUP50-218ENST00000493456 TAB2Q9NYJ8 693 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 PLEKHM1Q9Y4G2 1056 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 PCDHB3Q9Y5E6 796 aa17.57■□□□□ 0.4
NUP50-218ENST00000493456 NPIPB15A6NHN6 443 aaPredicted RBP17.56■□□□□ 0.4
NUP50-218ENST00000493456 A8MU76 341 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 MKRN2OSH3BPM6 223 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 POLR1CO15160 346 aaPredicted RBP17.56■□□□□ 0.4
NUP50-218ENST00000493456 MTSS1O43312 755 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 MAP3K6O95382 1288 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 PYGLP06737 847 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 KLK7P49862 253 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 EPHA4P54764 986 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 HHEXQ03014 270 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 SLC10A7Q0GE19 358 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 RALGPS1Q5JS13 557 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 ERMARDQ5T6L9 678 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 TCTN3Q6NUS6 607 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 C16orf46Q6P387 395 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 USP45Q70EL2 814 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 TECPR1Q7Z6L1 1165 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 ZNF761Q86XN6 746 aaPredicted RBP17.56■□□□□ 0.4
NUP50-218ENST00000493456 TEX19Q8NA77 164 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 SH3KBP1Q96B97 665 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 SCRN2Q96FV2 425 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 EPB41L1Q9H4G0 881 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 APMAPQ9HDC9 416 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 KCNMB2Q9Y691 235 aa17.56■□□□□ 0.4
NUP50-218ENST00000493456 EPHB6O15197 1021 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 SOD1P00441 154 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 TPM2P07951 284 aa17.55■□□□□ 0.4
NUP50-218ENST00000493456 OGDHQ02218 1023 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms