RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ZFP36L1Q07352 338 aaKnown RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 DPYSL3Q14195 570 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 MAP9Q49MG5 647 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 ZFYVE27Q5T4F4 411 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 ARHGAP40Q5TG30 622 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 DENND2CQ68D51 928 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 INO80CQ6PI98 192 aaPredicted RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 ZNF438Q7Z4V0 828 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 TECPR1Q7Z6L1 1165 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 LUZP1Q86V48 1076 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 C17orf82Q86X59 251 aaPredicted RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 JAMLQ86YT9 394 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 PGBD5Q8N414 524 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 ZSCAN1Q8NBB4 408 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 CCHCR1Q8TD31 782 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 CPLX3Q8WVH0 158 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 PIH1D2Q8WWB5 315 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 AP2M1Q96CW1 435 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 SCARF2Q96GP6 870 aaPredicted RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 LYSMD1Q96S90 227 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 SRPK1Q96SB4 655 aaKnown RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 SEMA3CQ99985 751 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 LGR4Q9BXB1 951 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 TDRD1Q9BXT4 1180 aaKnown RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 ADGRE3Q9BY15 652 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 DEF6Q9H4E7 631 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 STN1Q9H668 368 aaKnown RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 RMI1Q9H9A7 625 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 NT5MQ9NPB1 228 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 MRPL40Q9NQ50 206 aaKnown RBP8.73□□□□□ -1.01
NUP50-217ENST00000491860 RAD18Q9NS91 495 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 GOLGA6AQ9NYA3 693 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 PKD2L2Q9NZM6 624 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 VPS18Q9P253 973 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 CTTNBP2NLQ9P2B4 639 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 LOXL2Q9Y4K0 774 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 RNF215Q9Y6U7 377 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 SCN8AQ9UQD0 1980 aa8.73□□□□□ -1.01
NUP50-217ENST00000491860 SSU72P8A0A1W2PR75 194 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SYCE3A1L190 88 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 NPIPB15A6NHN6 443 aaPredicted RBP8.72□□□□□ -1.01
NUP50-217ENST00000491860 A8MX80 341 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 GPR89AB7ZAQ6 455 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 ARHGAP6O43182 974 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 GPR89BP0CG08 455 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SFTPCP11686 197 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 TCF4P15884 667 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 LHCGRP22888 699 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SLC5A2P31639 672 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 ADCY8P40145 1251 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 ARHGAP25P42331 645 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 GNPDA1P46926 289 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 ARSEP51690 589 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 MAXP61244 160 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 B4GALNT1Q00973 533 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 CLN3Q13286 438 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SQSTM1Q13501 440 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SLC18A3Q16572 532 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SKOR2Q2VWA4 1001 aaPredicted RBP8.72□□□□□ -1.01
NUP50-217ENST00000491860 ODF2Q5BJF6 829 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 ANKRD20A8PQ5CZ79 823 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 LRRC66Q68CR7 880 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 NCBP2-AS2Q69YL0 99 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 Q6ZVL8 140 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 BZW1Q7L1Q6 419 aaKnown RBP8.72□□□□□ -1.01
NUP50-217ENST00000491860 HSD11B1LQ7Z5J1 315 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 GALNT13Q8IUC8 556 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SLITRK4Q8IW52 837 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 TP53INP2Q8IXH6 220 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 Q8N9G6 341 aaPredicted RBP8.72□□□□□ -1.01
NUP50-217ENST00000491860 OR8K1Q8NGG5 319 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 EXD1Q8NHP7 514 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SH3KBP1Q96B97 665 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 FAF2Q96CS3 445 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 HDAC11Q96DB2 347 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 OR2M4Q96R27 311 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 MAK16Q9BXY0 300 aaKnown RBP8.72□□□□□ -1.01
NUP50-217ENST00000491860 BRD8Q9H0E9 1235 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 CAAP1Q9H8G2 361 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 CPNE5Q9HCH3 593 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 RBM22Q9NW64 420 aaKnown RBP eCLIP8.72□□□□□ -1.01
NUP50-217ENST00000491860 TAAR2Q9P1P5 351 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 RABGEF1Q9UJ41 708 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 SUFUQ9UMX1 484 aa8.72□□□□□ -1.01
NUP50-217ENST00000491860 ZFC3H1O60293 1989 aaKnown RBP8.72□□□□□ -1.01
NUP50-217ENST00000491860 HECTD1Q9ULT8 2610 aa8.71□□□□□ -1.01
NUP50-217ENST00000491860 A0A1W2PNU3 283 aaPredicted RBP8.71□□□□□ -1.02
NUP50-217ENST00000491860 PPP1R12AO14974 1030 aaPredicted RBP8.71□□□□□ -1.02
NUP50-217ENST00000491860 MFSD11O43934 449 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 WISP1O95388 367 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 ECEL1O95672 775 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 GYPCP04921 128 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 ITGB2P05107 769 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 FGF1P05230 155 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 TMEM253P0C7T8 217 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 IL4RP24394 825 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 CASP14P31944 242 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 ACTR1BP42025 376 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 ATP1A2P50993 1020 aa8.71□□□□□ -1.02
NUP50-217ENST00000491860 STC1P52823 247 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms