RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 LMO7DNF2Z398 122 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 J3QKU1 62 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 DXOO77932 396 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 NFKBIAP25963 317 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 STIP1P31948 543 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 PAFAH1B1P43034 410 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 TNNT3P45378 269 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 MMP13P45452 471 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 LSSP48449 732 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 MARCKSL1P49006 195 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 RPIAP49247 311 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 LIG3P49916 1009 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 BLKP51451 505 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 PCBP4P57723 403 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 EIF3EP60228 445 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 ETF1P62495 437 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 YPEL5P62699 121 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 POLR2LP62875 67 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 CXADRP78310 365 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 PPARDQ03181 441 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 PPIDQ08752 370 aaKnown RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 ELP6Q0PNE2 266 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 SLC10A2Q12908 348 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 NFATC4Q14934 902 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 LRRC14Q15048 493 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 FAXCQ5TGI0 409 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 PID1Q7Z2X4 250 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 SLC13A5Q86YT5 568 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 HID1Q8IV36 788 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 CDKL3Q8IVW4 592 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 NDUFAF2Q8N183 169 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 PELI3Q8N2H9 469 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 WDR48Q8TAF3 677 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 HCAR2Q8TDS4 363 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 LRRC45Q96CN5 670 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 ZNF578Q96N58 590 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 PSKH2Q96QS6 385 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 NAPGQ99747 312 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 CCDC3Q9BQI4 270 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 TLR10Q9BXR5 811 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 SYNDIG1Q9H7V2 258 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 RNF14Q9UBS8 474 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 FEZ2Q9UHY8 353 aaPredicted RBP11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 ATP8A1Q9Y2Q0 1164 aa11.04□□□□□ -0.64
TMEM39A-211ENST00000491685 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 CES2O00748 559 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 MFSD11O43934 449 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 JCHAINP01591 159 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 ANXA6P08133 673 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 CA4P22748 312 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 SCNN1BP51168 640 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 HK3P52790 923 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 INPP5AQ14642 412 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 CCDC70Q6NSX1 233 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 ERAP2Q6P179 960 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 ENPP7Q6UWV6 458 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 NPNTQ6UXI9 565 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 RBM44Q6ZP01 1051 aaKnown RBP11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 RD3Q7Z3Z2 195 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 B3GNT8Q7Z7M8 397 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 SRLQ86TD4 932 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 ZC3H18Q86VM9 953 aaKnown RBP11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 ZNF248Q8NDW4 579 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 SCG3Q8WXD2 468 aaKnown RBP11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 OR1E3Q8WZA6 343 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 CCDC74AQ96AQ1 378 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 ECHDC3Q96DC8 303 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 TBATAQ96M53 351 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 ZNF641Q96N77 438 aaPredicted RBP11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 TUBGCP5Q96RT8 1024 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 APOOQ9BUR5 198 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 SLC13A1Q9BZW2 595 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 FGF22Q9HCT0 170 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 MRPL40Q9NQ50 206 aaKnown RBP11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 GULP1Q9UBP9 304 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 TRHDEQ9UKU6 1024 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 SAR1BQ9Y6B6 198 aa11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 ARHGEF17Q96PE2 2063 aaPredicted RBP11.03□□□□□ -0.64
TMEM39A-211ENST00000491685 GOLGA6L10A0A0M3HER8 536 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 CFAP69A5D8W1 941 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 TMEM202A6NGA9 273 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 USP27XA6NNY8 438 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 A8MX80 341 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 NTN3O00634 580 aaPredicted RBP11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 MAP3K6O95382 1288 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 FGGP02679 453 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 RBP3P10745 1247 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 HTR1BP28222 390 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 SERPINA4P29622 427 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 SRP54P61011 504 aaKnown RBP11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 SKOR1P84550 965 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 OTUD4Q01804 1114 aaKnown RBP11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 CFHR1Q03591 330 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 BCL2L1Q07817 233 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 SLC10A7Q0GE19 358 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 PRPSAP1Q14558 356 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 AGERQ15109 404 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 PTPRRQ15256 657 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 CCNG2Q16589 344 aa11.02□□□□□ -0.65
TMEM39A-211ENST00000491685 TEX44Q53QW1 395 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms