RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 PRPSAP2O60256 369 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 SOCS5O75159 536 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 RNF8O76064 485 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 CR2P20023 1033 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 TNFAIP3P21580 790 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 NFKBIAP25963 317 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 MIPP30301 263 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 GPR1P46091 355 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 MAXP61244 160 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 TRAF2Q12933 501 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 PEX6Q13608 980 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 UBAP2LQ14157 1087 aaKnown RBP16.9■□□□□ 0.3
TOP3B-217ENST00000489581 RFLNAQ6ZTI6 216 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 MARK2Q7KZI7 788 aaKnown RBP16.9■□□□□ 0.3
TOP3B-217ENST00000489581 FNIP1Q8TF40 1166 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 AHCYL2Q96HN2 611 aaKnown RBP16.9■□□□□ 0.3
TOP3B-217ENST00000489581 ZNF599Q96NL3 588 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 CATSPER2Q96P56 530 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 OR2M4Q96R27 311 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 CTRCQ99895 268 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 DPYSL5Q9BPU6 564 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 PARVAQ9NVD7 372 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 CD84Q9UIB8 345 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 TUBD1Q9UJT1 453 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 PILRAQ9UKJ1 303 aa16.9■□□□□ 0.3
TOP3B-217ENST00000489581 B4E171 279 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 PSMD11O00231 422 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 DUX1O43812 170 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 PEX11BO96011 259 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 PRKAR1AP10644 381 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 CTPS1P17812 591 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 TEAD1P28347 426 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 TSPAN7P41732 249 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 GPLD1P80108 840 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 UBXN1Q04323 297 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 DPYSQ14117 519 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 PLEKHA7Q6IQ23 1121 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 TECPR1Q7Z6L1 1165 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 TRIM74Q86UV6 250 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 UNC5BQ8IZJ1 945 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 LZTR1Q8N653 840 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 SCRN2Q96FV2 425 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 SCARF2Q96GP6 870 aaPredicted RBP16.89■□□□□ 0.29
TOP3B-217ENST00000489581 SLC45A3Q96JT2 553 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 SLC38A3Q99624 504 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 ETNK2Q9NVF9 386 aa16.89■□□□□ 0.29
TOP3B-217ENST00000489581 LOC101059948A0A1B0GTJ6 334 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 TMEM191CA6NGB0 347 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 LGALS16A8MUM7 142 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 SOD1P00441 154 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 FERP16591 822 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 AMPD1P23109 780 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 CASRP41180 1078 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 HCAR3P49019 387 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 RAB15P59190 212 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 FOXK1P85037 733 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 PYCR3Q53H96 274 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 NLGN4XQ8N0W4 816 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 BMPERQ8N8U9 685 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 NLGN4YQ8NFZ3 816 aaPredicted RBP16.88■□□□□ 0.29
TOP3B-217ENST00000489581 OR10G6Q8NH81 332 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 SLC37A2Q8TED4 501 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 SCAMP4Q969E2 229 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 RTP4Q96DX8 246 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 SMIM14Q96QK8 99 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 MGME1Q9BQP7 344 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 SPRY4Q9C004 299 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 ABCG8Q9H221 673 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 ZWILCHQ9H900 591 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 GPN2Q9H9Y4 310 aaPredicted RBP16.88■□□□□ 0.29
TOP3B-217ENST00000489581 LIMA1Q9UHB6 759 aaKnown RBP16.88■□□□□ 0.29
TOP3B-217ENST00000489581 ANAPC2Q9UJX6 822 aa16.88■□□□□ 0.29
TOP3B-217ENST00000489581 RP1L1Q8IWN7 2480 aaPredicted RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 CAPN5O15484 640 aaPredicted RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 PGLSO95336 258 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 MAP3K6O95382 1288 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 EML2O95834 649 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 HSPA9P38646 679 aaKnown RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 MC2RQ01718 297 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 DPTQ07507 201 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 ARMC12Q5T9G4 340 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 ADAMTSL4Q6UY14 1074 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 USP45Q70EL2 814 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 TIPARPQ7Z3E1 657 aaKnown RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 IRF2BP2Q7Z5L9 587 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 ANKRD20A12PQ8NF67 263 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 C9orf43Q8TAL5 461 aaPredicted RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 PIH1D2Q8WWB5 315 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 KIAA1143Q96AT1 154 aaPredicted RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 AP2M1Q96CW1 435 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 TEFMQ96QE5 360 aaKnown RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 ERGIC2Q96RQ1 377 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 MCCC1Q96RQ3 725 aaPredicted RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 PDP2Q9P2J9 529 aa16.87■□□□□ 0.29
TOP3B-217ENST00000489581 SPTBN1Q01082 2364 aaKnown RBP16.87■□□□□ 0.29
TOP3B-217ENST00000489581 MAFKO60675 156 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 LRCH4O75427 683 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 PDHA1P08559 390 aa16.86■□□□□ 0.29
TOP3B-217ENST00000489581 CCDC172P0C7W6 258 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms