RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 MARCKSL1P49006 195 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 STC1P52823 247 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 PTSQ03393 145 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 CDK18Q07002 472 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 PRKD1Q15139 912 aaPredicted RBP13.47□□□□□ -0.25
LMO4-203ENST00000489303 PTPRRQ15256 657 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 SLC14A2Q15849 920 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 PCSK7Q16549 785 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 CDKN3Q16667 212 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 QPCTQ16769 361 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 BBS12Q6ZW61 710 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 B4GALNT4Q76KP1 1039 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 ZNF765Q7L2R6 523 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 PEX26Q7Z412 305 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 TECPR1Q7Z6L1 1165 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 TAF8Q7Z7C8 310 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 NLRP8Q86W28 1048 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 TMEM139Q8IV31 216 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 IFI44Q8TCB0 444 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 MAPK15Q8TD08 544 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 OR1E3Q8WZA6 343 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 NAT6Q93015 286 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 HAUS1Q96CS2 278 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 PDXPQ96GD0 296 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 TEKT5Q96M29 485 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 SRPK1Q96SB4 655 aaKnown RBP13.47□□□□□ -0.25
LMO4-203ENST00000489303 BOCQ9BWV1 1114 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 TEX101Q9BY14 249 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 CLPBQ9H078 707 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 ABCG8Q9H221 673 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 CYP4F12Q9HCS2 524 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 FGF22Q9HCT0 170 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 CD84Q9UIB8 345 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 PNMA8BQ9ULN7 279 aaPredicted RBP13.47□□□□□ -0.25
LMO4-203ENST00000489303 CLCA2Q9UQC9 943 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 SHROOM3Q8TF72 1996 aa13.47□□□□□ -0.25
LMO4-203ENST00000489303 A0A087WV48 116 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 PRSS38A1L453 326 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 EME2A4GXA9 379 aaPredicted RBP13.46□□□□□ -0.25
LMO4-203ENST00000489303 RGSL1A5PLK6 1076 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 MIF4GDA9UHW6 222 aaKnown RBP13.46□□□□□ -0.25
LMO4-203ENST00000489303 H7C0C1 242 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 CASC3O15234 703 aaKnown RBP13.46□□□□□ -0.25
LMO4-203ENST00000489303 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.25
LMO4-203ENST00000489303 TJP3O95049 919 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 CLDN7O95471 211 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 ATP5OP48047 213 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 CDK3Q00526 305 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 INSM1Q01101 510 aaPredicted RBP13.46□□□□□ -0.25
LMO4-203ENST00000489303 ADCY2Q08462 1091 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 XRCC4Q13426 336 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 PEX6Q13608 980 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 GALNT3Q14435 633 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 IHHQ14623 411 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 TCEA2Q15560 299 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 PID1Q7Z2X4 250 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 EFL1Q7Z2Z2 1120 aaKnown RBP13.46□□□□□ -0.25
LMO4-203ENST00000489303 KDELC2Q7Z4H8 507 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 CACTIN-AS1Q8N1I8 211 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 ARL10Q8N8L6 244 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 HTR3CQ8WXA8 447 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 QKIQ96PU8 341 aaKnown RBP eCLIP13.46□□□□□ -0.258e-8■■■■□ 26.5
LMO4-203ENST00000489303 DESI2Q9BSY9 194 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 LGR4Q9BXB1 951 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 OSBPL8Q9BZF1 889 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 TSGA10Q9BZW7 698 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 CARS2Q9HA77 564 aaKnown RBP13.46□□□□□ -0.25
LMO4-203ENST00000489303 RAD18Q9NS91 495 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 GULP1Q9UBP9 304 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 TRHDEQ9UKU6 1024 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 PADI4Q9UM07 663 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 GPR34Q9UPC5 381 aa13.46□□□□□ -0.25
LMO4-203ENST00000489303 ANKRD36A6QL64 1941 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 GRID2IPA4D2P6 1211 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 GOLGA6L9A6NEM1 432 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 NRDCO43847 1150 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 OPA1O60313 960 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 PMPCBO75439 489 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 STK10O94804 968 aaKnown RBP13.45□□□□□ -0.26
LMO4-203ENST00000489303 MT-CO3P00414 261 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 PRB1P04280 392 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 PTPN7P35236 360 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 EIF2S3P41091 472 aaKnown RBP13.45□□□□□ -0.26
LMO4-203ENST00000489303 ILF3Q12906 894 aaKnown RBP eCLIP13.45□□□□□ -0.26
LMO4-203ENST00000489303 ADAMTSL4Q6UY14 1074 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
LMO4-203ENST00000489303 PELI3Q8N2H9 469 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
LMO4-203ENST00000489303 LRRC57Q8N9N7 239 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 OR6C4Q8NGE1 309 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 SPATA22Q8NHS9 363 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 SCAMP4Q969E2 229 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 DEPDC7Q96QD5 511 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 SMIM14Q96QK8 99 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 RIOK2Q9BVS4 552 aaKnown RBP13.45□□□□□ -0.26
LMO4-203ENST00000489303 GSDMCQ9BYG8 508 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 FAM83DQ9H4H8 585 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 SUDS3Q9H7L9 328 aaPredicted RBP13.45□□□□□ -0.26
LMO4-203ENST00000489303 ZFYVE1Q9HBF4 777 aa13.45□□□□□ -0.26
LMO4-203ENST00000489303 MRPL40Q9NQ50 206 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms