RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 UBXN11Q5T124 520 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 ISCA2Q86U28 154 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 DHRSXQ8N5I4 330 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 CYP2S1Q96SQ9 504 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 TUBA1CQ9BQE3 449 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 POLR1BQ9H9Y6 1135 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 TMEM30AQ9NV96 361 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 RBM22Q9NW64 420 aaKnown RBP eCLIP19.49■□□□□ 0.71
HMG20B-213ENST00000488973 DNAJC15Q9Y5T4 150 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 PTCH2Q9Y6C5 1203 aa19.49■□□□□ 0.71
HMG20B-213ENST00000488973 PLXNB2O15031 1838 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 TPST1O60507 370 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 INHBBP09529 407 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 TSPAN8P19075 237 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 OXTRP30559 389 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 NAA20P61599 178 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 ZNF792Q3KQV3 632 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 TIGD7Q6NT04 549 aaPredicted RBP19.48■□□□□ 0.71
HMG20B-213ENST00000488973 ANKK1Q8NFD2 765 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 LRRC58Q96CX6 371 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 FBXL20Q96IG2 436 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 ATXN3LQ9H3M9 355 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 ARNT2Q9HBZ2 717 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 SMPD3Q9NY59 655 aaPredicted RBP19.48■□□□□ 0.71
HMG20B-213ENST00000488973 DKK3Q9UBP4 350 aa19.48■□□□□ 0.71
HMG20B-213ENST00000488973 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.47■□□□□ 0.71
HMG20B-213ENST00000488973 KDM1AO60341 852 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 KCNC1P48547 511 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 GRSF1Q12849 480 aaKnown RBP eCLIP19.47■□□□□ 0.71
HMG20B-213ENST00000488973 SPNS2Q8IVW8 549 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 PNPT1Q8TCS8 783 aaKnown RBP19.47■□□□□ 0.71
HMG20B-213ENST00000488973 SEZ6LQ9BYH1 1024 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 SLC39A8Q9C0K1 460 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 SLC38A7Q9NVC3 462 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 PCDHA9Q9Y5H5 950 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 GPC6Q9Y625 555 aaPredicted RBP19.47■□□□□ 0.71
HMG20B-213ENST00000488973 A0A1W2PPW3 197 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 MYBPHLA2RUH7 354 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 TMX2-CTNND1H3BSU7 103 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 EI24O14681 340 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 TNPO2O14787 897 aaKnown RBP19.47■□□□□ 0.71
HMG20B-213ENST00000488973 FGF10O15520 208 aaPredicted RBP19.47■□□□□ 0.71
HMG20B-213ENST00000488973 HTR7P34969 479 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 LHX1P48742 406 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 SH3BP2P78314 561 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 CYBRD1Q53TN4 286 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 AARS2Q5JTZ9 985 aaKnown RBP19.47■□□□□ 0.71
HMG20B-213ENST00000488973 TMEM207Q6UWW9 146 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 KCTD8Q6ZWB6 473 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 CILP2Q8IUL8 1156 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 PHYKPLQ8IUZ5 450 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 DDIASQ8IXT1 998 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 TRIM54Q9BYV2 358 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 KATNBL1Q9H079 304 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 TPK1Q9H3S4 243 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 CLEC11AQ9Y240 323 aa19.47■□□□□ 0.71
HMG20B-213ENST00000488973 SMIM35A0A1B0GVV1 85 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 PAPSS2O95340 614 aaPredicted RBP19.46■□□□□ 0.71
HMG20B-213ENST00000488973 HOXC13P31276 330 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 RFC2P35250 354 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 C21orf59P57076 290 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 GPR158Q5T848 1215 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 FAM219BQ5XKK7 198 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 USP51Q70EK9 711 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 KDELC2Q7Z4H8 507 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 ARRDC4Q8NCT1 418 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 PAPD5Q8NDF8 572 aaKnown RBP19.46■□□□□ 0.71
HMG20B-213ENST00000488973 DDHD1Q8NEL9 900 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 PLEKHA8Q96JA3 519 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 SIK2Q9H0K1 926 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 CATSPERBQ9H7T0 1116 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 SDR39U1Q9NRG7 319 aaPredicted RBP19.46■□□□□ 0.71
HMG20B-213ENST00000488973 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
HMG20B-213ENST00000488973 PKD2L2Q9NZM6 624 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 RABL2BQ9UNT1 228 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 IPPQ9Y573 584 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 OXSR1O95747 527 aaPredicted RBP19.46■□□□□ 0.71
HMG20B-213ENST00000488973 CLIC3O95833 236 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 UMPSP11172 480 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 ETFBP38117 255 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 WNT3AP56704 352 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 CAPRIN1Q14444 709 aaKnown RBP19.46■□□□□ 0.71
HMG20B-213ENST00000488973 MOGQ16653 247 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 FGD3Q5JSP0 725 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 TMEM26Q6ZUK4 368 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 PTRH1Q86Y79 214 aaKnown RBP19.46■□□□□ 0.71
HMG20B-213ENST00000488973 TMEM86AQ8N2M4 240 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 TSPEARQ8WU66 669 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 TWIST2Q8WVJ9 160 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 SMARCD1Q96GM5 515 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 SENP8Q96LD8 212 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 PALMDQ9NP74 551 aa19.46■□□□□ 0.71
HMG20B-213ENST00000488973 INTS10Q9NVR2 710 aaKnown RBP19.46■□□□□ 0.71
HMG20B-213ENST00000488973 AZIN1O14977 448 aa19.45■□□□□ 0.7
HMG20B-213ENST00000488973 FOXD2O60548 495 aaPredicted RBP19.45■□□□□ 0.7
HMG20B-213ENST00000488973 TPPPO94811 219 aa19.45■□□□□ 0.7
HMG20B-213ENST00000488973 CDK14O94921 469 aa19.45■□□□□ 0.7
HMG20B-213ENST00000488973 RPS9P46781 194 aaKnown RBP19.45■□□□□ 0.7
HMG20B-213ENST00000488973 HLCSP50747 726 aa19.45■□□□□ 0.7
HMG20B-213ENST00000488973 CYP51A1Q16850 503 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms