RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ALS2CLQ60I27 953 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 DENND5AQ6IQ26 1287 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 ESRP1Q6NXG1 681 aaKnown RBP15.69■□□□□ 0.1
C9orf3-219ENST00000488186 RFLNAQ6ZTI6 216 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 PCGF5Q86SE9 256 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 KIAA2013Q8IYS2 634 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 PLA2G15Q8NCC3 412 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 SCAMP4Q969E2 229 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 APOOQ9BUR5 198 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 EDEM2Q9BV94 578 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 RIOK2Q9BVS4 552 aaKnown RBP15.69■□□□□ 0.1
C9orf3-219ENST00000488186 SPATA16Q9BXB7 569 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 PHPT1Q9NRX4 125 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-219ENST00000488186 BFARQ9NZS9 450 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 SNX11Q9Y5W9 270 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 PCDH15Q96QU1 1955 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 DOCK9Q9BZ29 2069 aa15.69■□□□□ 0.1
C9orf3-219ENST00000488186 TTI1O43156 1089 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 BUD23O43709 281 aaKnown RBP15.68■□□□□ 0.1
C9orf3-219ENST00000488186 DFNA5O60443 496 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 GM2AP17900 193 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 DEKP35659 375 aaKnown RBP15.68■□□□□ 0.1
C9orf3-219ENST00000488186 NXPH1P58417 271 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 DPTQ07507 201 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 HLA-BQ31612 363 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 NLRP8Q86W28 1048 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 JAMLQ86YT9 394 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 PPIL6Q8IXY8 311 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 TTC30BQ8N4P2 665 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 OXR1Q8N573 874 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 NETO1Q8TDF5 533 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 GAREM1Q9H706 876 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 WDR26Q9H7D7 661 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 CASS4Q9NQ75 786 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 OR1A2Q9Y585 309 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 ARL5AQ9Y689 179 aa15.68■□□□□ 0.1
C9orf3-219ENST00000488186 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.68■□□□□ 0.1
C9orf3-219ENST00000488186 PLXNA2O75051 1894 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 LNP1A1A4G5 178 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 FAM187AA6NFU0 413 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 BPIP17213 487 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 KELP23276 732 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 SPAM1P38567 509 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 GRIA1P42261 906 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 CTSKP43235 329 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 NPY2RP49146 381 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 ARRB1P49407 418 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-219ENST00000488186 SESN2P58004 480 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-219ENST00000488186 PFN3P60673 137 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 TMPRSS15P98073 1019 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 CERCAMQ5T4B2 595 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 LRRC8BQ6P9F7 803 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 ENPP7Q6UWV6 458 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 MINDY1Q8N5J2 469 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 OR4K2Q8NGD2 314 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 EID2BQ96D98 161 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 ZSCAN5AQ9BUG6 496 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 TRIM31Q9BZY9 425 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 TMEM9BQ9NQ34 198 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 IL17CQ9P0M4 197 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 MOSPD1Q9UJG1 213 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 NEU2Q9Y3R4 380 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 MRFAP1Q9Y605 127 aa15.67■□□□□ 0.1
C9orf3-219ENST00000488186 ASCC3Q8N3C0 2202 aaKnown RBP15.67■□□□□ 0.1
C9orf3-219ENST00000488186 CNOT1A5YKK6 2376 aaKnown RBP15.67■□□□□ 0.1
C9orf3-219ENST00000488186 HEATR9A2RTY3 570 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 CTAGE15A4D2H0 777 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 EFCAB8A8MWE9 144 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 GOLGA8MH3BSY2 632 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 K7ESM1 405 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 DNALI1O14645 258 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-219ENST00000488186 NDC80O14777 642 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 CTAGE8P0CG41 777 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 ADRA1DP25100 572 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 TRIM23P36406 574 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 HADHAP40939 763 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 DCDC1P59894 354 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 KCNJ11Q14654 390 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 NFATC4Q14934 902 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 SKIDA1Q1XH10 827 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 UAP1L1Q3KQV9 507 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 PRAMEF14Q5SWL7 426 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 IZUMO3Q5VZ72 239 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 ZNF572Q7Z3I7 529 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-219ENST00000488186 CTAGE6Q86UF2 777 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 HEATR4Q86WZ0 1026 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 CTAGE4Q8IX94 777 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 GPR26Q8NDV2 337 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 PPHLN1Q8NEY8 458 aaKnown RBP15.66■□□□□ 0.1
C9orf3-219ENST00000488186 CPT1BQ92523 772 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 PLEKHG4BQ96PX9 1271 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 TRIM51Q9BSJ1 452 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 ERVMER34-1Q9H9K5 563 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 DNAJC28Q9NX36 388 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 DLL3Q9NYJ7 618 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 APPL1Q9UKG1 709 aa15.66■□□□□ 0.1
C9orf3-219ENST00000488186 UTP11Q9Y3A2 253 aaKnown RBP15.66■□□□□ 0.1
C9orf3-219ENST00000488186 PCNX2A6NKB5 2137 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 LRRK1Q38SD2 2015 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 GLYATL1P3A0A0U1RQE8 302 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms