RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 CCDC13Q8IYE1 715 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 FRMD1Q8N878 549 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 KCNG4Q8TDN1 519 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 FIG4Q92562 907 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 ARHGEF26Q96DR7 871 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 KCNN2Q9H2S1 579 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 ZHX3Q9H4I2 956 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 SLC28A3Q9HAS3 691 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 SCPEP1Q9HB40 452 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 ORC3Q9UBD5 711 aaPredicted RBP4.41□□□□□ -1.7
PTEN-204ENST00000487939 LOXL2Q9Y4K0 774 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 CNTNAP2Q9UHC6 1331 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 A0A0G2JPF8 293 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 HNRNPCL3B7ZW38 293 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 PRR23D1E9PI22 279 aaPredicted RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 F5H0A9 414 aaPredicted RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 SPINT2O43291 252 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 HNRNPCL1O60812 293 aaKnown RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 NDUFS3O75489 264 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 DDX58O95786 925 aaKnown RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 EGFP01133 1207 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 AFPP02771 609 aaKnown RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 PRR23D2P0DMB1 279 aaPredicted RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 HNRNPCL4P0DMR1 293 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 CDH2P19022 906 aaPredicted RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 MCM3P25205 808 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 PBX3P40426 434 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 F2RL1P55085 397 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 GRIK2Q13002 908 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 TRNP1Q6NT89 227 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 DUS1LQ6P1R4 473 aaKnown RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 TUBA1AQ71U36 451 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 RSRC2Q7L4I2 434 aaKnown RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 NAGSQ8N159 534 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 SECTM1Q8WVN6 248 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 ARHGEF2Q92974 986 aaKnown RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 ORAI1Q96D31 301 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 ACOX2Q99424 681 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 TUBA1CQ9BQE3 449 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 UBTD1Q9HAC8 227 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 ZNF556Q9HAH1 456 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 EBF2Q9HAK2 575 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 LTB4R2Q9NPC1 389 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 PLSCR4Q9NRQ2 329 aa4.4□□□□□ -1.71
PTEN-204ENST00000487939 ACSS1Q9NUB1 689 aaPredicted RBP4.4□□□□□ -1.71
PTEN-204ENST00000487939 A0A087X0M5 115 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 FAM237BA0A1B0GVD1 139 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 A0A1B0GX30 115 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 LDB3O75112 727 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 KRT36O76013 467 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 EIF2S1P05198 315 aaKnown RBP4.39□□□□□ -1.71
PTEN-204ENST00000487939 UBA1P22314 1058 aaKnown RBP4.39□□□□□ -1.71
PTEN-204ENST00000487939 NFKBIAP25963 317 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 ARL3P36405 182 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 USP8P40818 1118 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 IL15P40933 162 aaPredicted RBP4.39□□□□□ -1.71
PTEN-204ENST00000487939 TMPOP42166 694 aaKnown RBP4.39□□□□□ -1.71
PTEN-204ENST00000487939 RGS19P49795 217 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 NLRP5P59047 1200 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 TFAP4Q01664 338 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 NIPAL4Q0D2K0 466 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 TROAPQ12815 778 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 ADIPOQQ15848 244 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 KCNT1Q5JUK3 1230 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 DCST1Q5T197 706 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 NCEH1Q6PIU2 408 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 CYP20A1Q6UW02 462 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 MAATS1Q7Z4T9 603 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 ARHGAP12Q8IWW6 846 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 ADSSL1Q8N142 457 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 RFLNBQ8N5W9 214 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 RBMXL3Q8N7X1 1067 aaKnown RBP4.39□□□□□ -1.71
PTEN-204ENST00000487939 PDILTQ8N807 584 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 OR14L1PQ8NHC6 308 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 POMGNT1Q8WZA1 660 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 IGSF8Q969P0 613 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 RANGRFQ9HD47 186 aaPredicted RBP4.39□□□□□ -1.71
PTEN-204ENST00000487939 RRP7BPQ9NSQ0 103 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 SMC4Q9NTJ3 1288 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 UBA2Q9UBT2 640 aaPredicted RBP4.39□□□□□ -1.71
PTEN-204ENST00000487939 CNOT8Q9UFF9 292 aaKnown RBP4.39□□□□□ -1.71
PTEN-204ENST00000487939 KCNG2Q9UJ96 466 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 PCDHAC2Q9Y5I4 1007 aa4.39□□□□□ -1.71
PTEN-204ENST00000487939 A0A1W2PQF6 199 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 HS3ST1O14792 307 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 HCRTR2O43614 444 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 BUB3O43684 328 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 JRKO75564 520 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 RNASEH2AO75792 299 aaKnown RBP4.38□□□□□ -1.71
PTEN-204ENST00000487939 SCGB1D1O95968 90 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 CD53P19397 219 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 GNL1P36915 607 aaPredicted RBP4.38□□□□□ -1.71
PTEN-204ENST00000487939 PDE1BQ01064 536 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 CEBPZQ03701 1054 aaKnown RBP4.38□□□□□ -1.71
PTEN-204ENST00000487939 LRMPQ12912 555 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 ZBTB17Q13105 803 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 MAD2L1Q13257 205 aaPredicted RBP4.38□□□□□ -1.71
PTEN-204ENST00000487939 KRT32Q14532 448 aa4.38□□□□□ -1.71
PTEN-204ENST00000487939 ZNF672Q499Z4 452 aaPredicted RBP4.38□□□□□ -1.71
PTEN-204ENST00000487939 CDONQ4KMG0 1287 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms