RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 LSMEM2Q8N112 164 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CNTD1Q8N815 330 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 RNF214Q8ND24 703 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 FAM46DQ8NEK8 389 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 OR6C4Q8NGE1 309 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 WDR36Q8NI36 951 aaKnown RBP11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 SLC35G2Q8TBE7 412 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 SCAMP4Q969E2 229 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 SCARF2Q96GP6 870 aaPredicted RBP11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 COX14Q96I36 57 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 RNF157Q96PX1 679 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 GFM1Q96RP9 751 aaKnown RBP11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 UBL7Q96S82 380 aaPredicted RBP11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 LYSMD1Q96S90 227 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 AGAP2Q99490 1192 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CEP41Q9BYV8 373 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 BRD8Q9H0E9 1235 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ABCG8Q9H221 673 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TSPY26PQ9H489 355 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 SUDS3Q9H7L9 328 aaPredicted RBP11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 SPATS2LQ9NUQ6 558 aaKnown RBP11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 RBM22Q9NW64 420 aaKnown RBP eCLIP11.18□□□□□ -0.621e-7■■■□□ 19.1
RAB11FIP3-210ENST00000487899 TRNAU1APQ9NX07 287 aaKnown RBP11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 KCTD5Q9NXV2 234 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 GOLGA6AQ9NYA3 693 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CHKBQ9Y259 395 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 COL6A6A6NMZ7 2263 aa11.18□□□□□ -0.62
RAB11FIP3-210ENST00000487899 SPENQ96T58 3664 aaKnown RBP11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 NUDT21O43809 227 aaKnown RBP11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 C1QL1O75973 258 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ITGA2BP08514 1039 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 PNLIPP16233 465 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 MX2P20592 715 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 MLLT3P42568 568 aaPredicted RBP11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 PTSQ03393 145 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ITKQ08881 620 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TBX2Q13207 712 aaPredicted RBP11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 SKOR2Q2VWA4 1001 aaPredicted RBP11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 DOK6Q6PKX4 331 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 SLC30A9Q6PML9 568 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 NPNTQ6UXI9 565 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 MAP7D3Q8IWC1 876 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CCDC13Q8IYE1 715 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 LPCAT1Q8NF37 534 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 KIAA1524Q8TCG1 905 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 KCNE4Q8WWG9 221 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 PATE1Q8WXA2 126 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 AP2M1Q96CW1 435 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 WDR24Q96S15 920 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 LRRN3Q9H3W5 708 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 DPEP2Q9H4A9 486 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 NHEJ1Q9H9Q4 299 aaPredicted RBP11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 PCDH9Q9HC56 1237 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CPNE5Q9HCH3 593 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 EPB41L5Q9HCM4 733 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TAAR2Q9P1P5 351 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 MOSPD1Q9UJG1 213 aa11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ATXN7L1Q9ULK2 861 aaPredicted RBP11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 OAS3Q9Y6K5 1087 aaKnown RBP11.17□□□□□ -0.62
RAB11FIP3-210ENST00000487899 C1orf232A0A0U1RR37 186 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 FADS2P1A8MWK0 482 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 PLD2O14939 933 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ATXN7O15265 892 aaPredicted RBP11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CLDN7O95471 211 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 KRT1P04264 644 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 FGF1P05230 155 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 HGFP14210 728 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 UGT1A5P35504 534 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ADCY8P40145 1251 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CD86P42081 329 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 NOP2P46087 812 aaKnown RBP11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 GPR1P46091 355 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 RPL26P61254 145 aaKnown RBP11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CXADRP78310 365 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CTBSQ01459 385 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ZFP36L1Q07352 338 aaKnown RBP11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ILF3Q12906 894 aaKnown RBP eCLIP11.16□□□□□ -0.622e-11■■■■■ 38
RAB11FIP3-210ENST00000487899 GALNT3Q14435 633 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TCEAL1Q15170 157 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TAZQ16635 292 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 QPCTQ16769 361 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 HENMT1Q5T8I9 393 aaKnown RBP11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 LRRC38Q5VT99 294 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 FOXR1Q6PIV2 292 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 RHOT2Q8IXI1 618 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 NAGSQ8N159 534 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ZDHHC1Q8WTX9 485 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TADA1Q96BN2 335 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 EID2BQ96D98 161 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ZNF830Q96NB3 372 aaPredicted RBP11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 OR2M4Q96R27 311 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 TRIB3Q96RU7 358 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 GSDMCQ9BYG8 508 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 CDH19Q9H159 772 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 GOLPH3Q9H4A6 298 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 LRIT1Q9P2V4 623 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 ACSL6Q9UKU0 697 aa11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 RPL26L1Q9UNX3 145 aaKnown RBP11.16□□□□□ -0.62
RAB11FIP3-210ENST00000487899 PLEKHM1Q9Y4G2 1056 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms