RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 ZNF599Q96NL3 588 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 MGME1Q9BQP7 344 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 DDA1Q9BW61 102 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 CDH19Q9H159 772 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 EPN3Q9H201 632 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 ADNPQ9H2P0 1102 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 ETNK2Q9NVF9 386 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 SLC39A1Q9NY26 324 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 KCNK4Q9NYG8 393 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 TMEM98Q9Y2Y6 226 aa11.96□□□□□ -0.49
GCA-208ENST00000479199 SPTAN1Q13813 2472 aaKnown RBP11.95□□□□□ -0.5
GCA-208ENST00000479199 SPTBN1Q01082 2364 aaKnown RBP11.95□□□□□ -0.5
GCA-208ENST00000479199 TMEM191CA6NGB0 347 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 EFCAB7A8K855 629 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 H3BRJ5 948 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 PSMD11O00231 422 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 ZW10O43264 779 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 DUX1O43812 170 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 RAD1O60671 282 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 RNF8O76064 485 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 PGLSO95336 258 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 TCF4P15884 667 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 AMPD1P23109 780 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 TEAD1P28347 426 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 CSTF2P33240 577 aaKnown RBP eCLIP11.95□□□□□ -0.52e-7■■■■■ 34
GCA-208ENST00000479199 HSPA9P38646 679 aaKnown RBP11.95□□□□□ -0.5
GCA-208ENST00000479199 GPR1P46091 355 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 PPM1FP49593 454 aaPredicted RBP11.95□□□□□ -0.5
GCA-208ENST00000479199 MARK2Q7KZI7 788 aaKnown RBP11.95□□□□□ -0.5
GCA-208ENST00000479199 IRF2BP2Q7Z5L9 587 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 CBARPQ8N350 705 aaPredicted RBP11.95□□□□□ -0.5
GCA-208ENST00000479199 ATPAF2Q8N5M1 289 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 BMPERQ8N8U9 685 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 SLC37A2Q8TED4 501 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 MCCC1Q96RQ3 725 aaPredicted RBP11.95□□□□□ -0.5
GCA-208ENST00000479199 HSD3B7Q9H2F3 369 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 PHTF1Q9UMS5 762 aa11.95□□□□□ -0.5
GCA-208ENST00000479199 TNRC6AQ8NDV7 1962 aaKnown RBP11.94□□□□□ -0.5
GCA-208ENST00000479199 TRBV23OR9-2A0A075B6M9 112 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 A0A1W2PQ67 120 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 MAFKO60675 156 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 MAP3K6O95382 1288 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 EML2O95834 649 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 PRKAR1AP10644 381 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 IL1R2P27930 398 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 HCAR3P49019 387 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 MYL5Q02045 173 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 PYCR3Q53H96 274 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 SNAP47Q5SQN1 464 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 ARMC12Q5T9G4 340 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 E4F1Q66K89 784 aaPredicted RBP11.94□□□□□ -0.5
GCA-208ENST00000479199 LRRC66Q68CR7 880 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 TMCO3Q6UWJ1 677 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 RBM43Q6ZSC3 357 aaKnown RBP11.94□□□□□ -0.5
GCA-208ENST00000479199 USP45Q70EL2 814 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 TECPR1Q7Z6L1 1165 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 PSTKQ8IV42 348 aaKnown RBP11.94□□□□□ -0.5
GCA-208ENST00000479199 NRSN1Q8IZ57 195 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 HSPH1Q92598 858 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 SCAMP4Q969E2 229 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 ZNF653Q96CK0 615 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 AP2M1Q96CW1 435 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 SCARF2Q96GP6 870 aaPredicted RBP11.94□□□□□ -0.5
GCA-208ENST00000479199 AGAP2Q99490 1192 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 CTRCQ99895 268 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 ABCG8Q9H221 673 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 ZWILCHQ9H900 591 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 KCTD5Q9NXV2 234 aa11.94□□□□□ -0.5
GCA-208ENST00000479199 CNOT8Q9UFF9 292 aaKnown RBP11.94□□□□□ -0.5
GCA-208ENST00000479199 PCYT1BQ9Y5K3 369 aaPredicted RBP11.94□□□□□ -0.5
GCA-208ENST00000479199 LRRC53A6NM62 1247 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 ZNF891A8MT65 544 aaPredicted RBP11.93□□□□□ -0.5
GCA-208ENST00000479199 A8MU76 341 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 B4E171 279 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 INPP4BO15327 924 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 NKX2-8O15522 239 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 PDHA1P08559 390 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 CCDC172P0C7W6 258 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 ATP1A3P13637 1013 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 NFKBIAP25963 317 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 ARL4AP40617 200 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 TSPAN7P41732 249 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 MMP13P45452 471 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 CCR10P46092 362 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 FASLGP48023 281 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 ZNF135P52742 658 aaPredicted RBP11.93□□□□□ -0.5
GCA-208ENST00000479199 RAB15P59190 212 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 GPLD1P80108 840 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 DPTQ07507 201 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 CDC20Q12834 499 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 SQSTM1Q13501 440 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 PEX6Q13608 980 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 DPYSL2Q16555 572 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 DCAF12Q5T6F0 453 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 PPP1R2P3Q6NXS1 205 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 TMEM71Q6P5X7 295 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 ADAMTSL4Q6UY14 1074 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 POLNQ7Z5Q5 900 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 GALNT13Q8IUC8 556 aa11.93□□□□□ -0.5
GCA-208ENST00000479199 UNC5BQ8IZJ1 945 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms