RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 NEK11Q8NG66 645 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 OR10G6Q8NH81 332 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 RTP4Q96DX8 246 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 SCRN2Q96FV2 425 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 AHCYL2Q96HN2 611 aaKnown RBP9.62□□□□□ -0.87
CCM2-210ENST00000478169 NSMCE3Q96MG7 304 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 OR2M4Q96R27 311 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 NUDCD1Q96RS6 583 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 SLC38A3Q99624 504 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 SPRY4Q9C004 299 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 TRIT1Q9H3H1 467 aaKnown RBP9.62□□□□□ -0.87
CCM2-210ENST00000478169 GPN2Q9H9Y4 310 aaPredicted RBP9.62□□□□□ -0.87
CCM2-210ENST00000478169 GPATCH2LQ9NWQ4 482 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 OCIAD1Q9NX40 245 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 PCDHGC4Q9Y5F7 938 aa9.62□□□□□ -0.87
CCM2-210ENST00000478169 SPTAN1Q13813 2472 aaKnown RBP9.62□□□□□ -0.87
CCM2-210ENST00000478169 GOLGA6CA6NDK9 693 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 GOLGA6BA6NDN3 693 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 NKX2-8O15522 239 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 DUX1O43812 170 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 RNF8O76064 485 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 PYGLP06737 847 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 CCDC172P0C7W6 258 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 GOLGA6DP0CG33 693 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 LHCGRP22888 699 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 MPSTP25325 297 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 GPR1P46091 355 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 POLD2P49005 469 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 MC2RQ01718 297 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 MC1RQ01726 317 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 ABHD18Q0P651 414 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 CDC20Q12834 499 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 MAMLD1Q13495 774 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 ZNF235Q14590 738 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 NCAPHQ15003 741 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 CRTC2Q53ET0 693 aaPredicted RBP9.61□□□□□ -0.87
CCM2-210ENST00000478169 DENND2CQ68D51 928 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 CEACAM20Q6UY09 585 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 ADAMTSL4Q6UY14 1074 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 Q6ZVL8 140 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 ARHGAP22Q7Z5H3 698 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 HSD11B1LQ7Z5J1 315 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 TECPR1Q7Z6L1 1165 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 NLRP8Q86W28 1048 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 LURAP1LQ8IV03 231 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 BBS5Q8N3I7 341 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 SFRP1Q8N474 314 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 ARFGAP1Q8N6T3 406 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 PDCD6IPQ8WUM4 868 aaKnown RBP9.61□□□□□ -0.87
CCM2-210ENST00000478169 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
CCM2-210ENST00000478169 APOBEC4Q8WW27 367 aaKnown RBP9.61□□□□□ -0.87
CCM2-210ENST00000478169 MCCC1Q96RQ3 725 aaPredicted RBP9.61□□□□□ -0.87
CCM2-210ENST00000478169 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
CCM2-210ENST00000478169 SNRNP25Q9BV90 132 aaKnown RBP9.61□□□□□ -0.87
CCM2-210ENST00000478169 FBXO8Q9NRD0 319 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 PARVAQ9NVD7 372 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 GOLGA6AQ9NYA3 693 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 TMEM9Q9P0T7 183 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 PCSK1NQ9UHG2 260 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 PPIL1Q9Y3C6 166 aa9.61□□□□□ -0.87
CCM2-210ENST00000478169 USP9XQ93008 2570 aaPredicted RBP9.61□□□□□ -0.87
CCM2-210ENST00000478169 NBPF19A0A087WUL8 3843 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 RELNP78509 3460 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 ZNF106Q9H2Y7 1883 aaKnown RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 LOC101059948A0A1B0GTJ6 334 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 TTC24A2A3L6 582 aaPredicted RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 NPIPB15A6NHN6 443 aaPredicted RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 PRPSAP2O60256 369 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 PGLSO95336 258 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 PEX11BO96011 259 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 DPYSQ14117 519 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 SEPT6Q14141 434 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 IGFBP7Q16270 282 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 PYCR3Q53H96 274 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 PPP6R3Q5H9R7 873 aaPredicted RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 ARMC12Q5T9G4 340 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 PLEKHA7Q6IQ23 1121 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 USP45Q70EL2 814 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 NDUFAF2Q8N183 169 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 FAM26EQ8N5C1 309 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 SLC37A2Q8TED4 501 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 FNIP1Q8TF40 1166 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 SH3KBP1Q96B97 665 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 AP2M1Q96CW1 435 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 ABHD17AQ96GS6 310 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 PCMTD1Q96MG8 357 aaPredicted RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 PEBP4Q96S96 227 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 MGME1Q9BQP7 344 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 ZMYND15Q9H091 742 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 NUP62CLQ9H1M0 184 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 ZWILCHQ9H900 591 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 NOD2Q9HC29 1040 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 ZNF71Q9NQZ8 489 aaPredicted RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 CWC15Q9P013 229 aaKnown RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 PLEKHM1Q9Y4G2 1056 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 TMEM184BQ9Y519 407 aaPredicted RBP9.6□□□□□ -0.87
CCM2-210ENST00000478169 TEX15Q9BXT5 2789 aa9.6□□□□□ -0.87
CCM2-210ENST00000478169 TMEM191CA6NGB0 347 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms