RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 LINGO4Q6UY18 593 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 TPGS1Q6ZTW0 290 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 TPRG1Q6ZUI0 275 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 ASRGL1Q7L266 308 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 CEP97Q8IW35 865 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 C10orf67Q8IYJ2 551 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 APCDD1Q8J025 514 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 TMEM151AQ8N4L1 468 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 CHCHD4Q8N4Q1 142 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 PAF1Q8N7H5 531 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 MDGA1Q8NFP4 955 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 OR13C4Q8NGS5 318 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 STAG3L4Q8TBR4 150 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 GRIN3AQ8TCU5 1115 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 HEXDCQ8WVB3 486 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 LPGAT1Q92604 370 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 KCNJ9Q92806 393 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 ULK4Q96C45 1275 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 NXNL1Q96CM4 212 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 ECHDC3Q96DC8 303 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 NSL1Q96IY1 281 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 EXOC2Q96KP1 924 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 RILPQ96NA2 401 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 C17orf80Q9BSJ5 609 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 CCDC28BQ9BUN5 200 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 GATA5Q9BWX5 397 aaPredicted RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 BBS2Q9BXC9 721 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 DERL2Q9GZP9 239 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 PIDD1Q9HB75 910 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 ZFYVE1Q9HBF4 777 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 IGSF5Q9NSI5 407 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 FBXO10Q9UK96 956 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 FCF1Q9Y324 198 aaKnown RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 SPO11Q9Y5K1 396 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 HCFC2Q9Y5Z7 792 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 OAS3Q9Y6K5 1087 aaKnown RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 CCDC195A0A1B0GUA6 201 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 TTC24A2A3L6 582 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 EIF3FO00303 357 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 FCHO1O14526 889 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 PRMT5O14744 637 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 DLX3O60479 287 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 RASSF9O75901 435 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SRP72O76094 671 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 RHOBTB1O94844 696 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 NFATC1O95644 943 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 PDHA1P08559 390 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 CYP2A6P11509 494 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 TYRP14679 529 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 EZRP15311 586 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 NQO1P15559 274 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 EPCAMP16422 314 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 ZNF37AP17032 561 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 ZNF30P17039 623 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 GJA1P17302 382 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 POLR2EP19388 210 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 AOC1P19801 751 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 IMPDH1P20839 514 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SERPINB3P29508 390 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 HLA-FP30511 346 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 MC4RP32245 332 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 CD70P32970 193 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 ABL2P42684 1182 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SATB1Q01826 763 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 CAMK1Q14012 370 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 EIF4HQ15056 248 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 DUSP6Q16828 381 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 RBM20Q5T481 1227 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 SEL1L3Q68CR1 1132 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 METTL2BQ6P1Q9 378 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 ZCCHC23Q6ZST2 131 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 ACAD11Q709F0 780 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SNX20Q7Z614 316 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 MFSD6LQ8IWD5 586 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 ADGRG2Q8IZP9 1017 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 RBFAQ8N0V3 343 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 ACVR1CQ8NER5 493 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 CFAP61Q8NHU2 1237 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 WFDC5Q8TCV5 224 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 OSCP1Q8WVF1 389 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SMG7Q92540 1137 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 KIAA1191Q96A73 305 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 ZNF707Q96C28 371 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 CMTM5Q96DZ9 223 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 L3HYPDHQ96EM0 354 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SCRN2Q96FV2 425 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 PDLIM5Q96HC4 596 aaKnown RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 PLEKHG4BQ96PX9 1271 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 MCCC1Q96RQ3 725 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 SORT1Q99523 831 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 OLFM1Q99784 485 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SUV39H2Q9H5I1 410 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 TLE6Q9H808 572 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 TRPV4Q9HBA0 871 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 PFDN4Q9NQP4 134 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.91□□□□□ -1.14
VMA21-203ENST00000477649 ZNF358Q9NW07 568 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 POLR3BQ9NW08 1133 aaPredicted RBP7.91□□□□□ -1.14
VMA21-203ENST00000477649 HCFC1R1Q9NWW0 138 aa7.91□□□□□ -1.14
VMA21-203ENST00000477649 THG1LQ9NWX6 298 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms