RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CCDC91Q7Z6B0 441 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 DSG4Q86SJ6 1040 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 CLEC14AQ86T13 490 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 LCA5Q86VQ0 697 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 CBARPQ8N350 705 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-210ENST00000475329 TMIEQ8NEW7 156 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 FAM45AQ8TCE6 357 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 EID2BQ96D98 161 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 NDNQ99608 321 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 OMDQ99983 421 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 P2RY13Q9BPV8 354 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 NSRP1Q9H0G5 558 aaKnown RBP13.7□□□□□ -0.22
TRAF4-210ENST00000475329 B4GALT6Q9UBX8 382 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 SUN2Q9UH99 717 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 APPL1Q9UKG1 709 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 CDH23Q9H251 3354 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 A0A087X1B8 175 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 GLYATL1P3A0A0U1RQE8 302 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 UBA6A0AVT1 1052 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 C16orf96A6NNT2 1141 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 A8MX80 341 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 KPNA3O00505 521 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 NPC1O15118 1278 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 PHGDHO43175 533 aaKnown RBP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 PRAMEF1O95521 474 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 TOP3BO95985 862 aaKnown RBP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 VIMP08670 466 aaKnown RBP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 SLC35E2BP0CK96 405 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 PRSS56P0CW18 603 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 COL6A2P12110 1019 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 HNRNPLP14866 589 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 TIMP2P16035 220 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 BPIP17213 487 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 LHCGRP22888 699 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 ITGB7P26010 798 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 IL12RB1P42701 662 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 TNFRSF4P43489 277 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 SERPINB4P48594 390 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 TAS2R39P59534 338 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 IRF9Q00978 393 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 ARHGEF7Q14155 803 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 SKIV2LQ15477 1246 aaKnown RBP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 LRRC73Q5JTD7 316 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 EGFLAMQ63HQ2 1017 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 PSAPL1Q6NUJ1 521 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 FAM151BQ6UXP7 276 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 RGS9BPQ6ZS82 235 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 ARMC2Q8NEN0 867 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 PIP4K2CQ8TBX8 421 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 LRRC8CQ8TDW0 803 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 PPP1R16AQ96I34 528 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 ZNF317Q96PQ6 595 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 CCDC68Q9H2F9 335 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 PCDH12Q9NPG4 1184 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 PKD2L2Q9NZM6 624 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-210ENST00000475329 CRYL1Q9Y2S2 319 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
TRAF4-210ENST00000475329 TCP11X1B4DZS4 312 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 C1QTNF3-AMACRE9PGA6 284 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 SPECC1L-ADORA2AF8WAN1 911 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 GAPDHSO14556 408 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-210ENST00000475329 PLIN3O60664 434 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 SRP72O76094 671 aaKnown RBP13.68□□□□□ -0.22
TRAF4-210ENST00000475329 FAM107AO95990 144 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 PROCP04070 461 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 C1SP09871 688 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-210ENST00000475329 TAC1P20366 129 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 CTHP32929 405 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-210ENST00000475329 GALK1P51570 392 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 KPNA2P52292 529 aaKnown RBP13.68□□□□□ -0.22
TRAF4-210ENST00000475329 SEMG2Q02383 582 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-210ENST00000475329 DBN1Q16643 649 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 TSNAXIP1Q2TAA8 658 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 CCDC153Q494R4 210 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 LYPLAL1Q5VWZ2 237 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 ERAP2Q6P179 960 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 CERS6Q6ZMG9 384 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 DPPA4Q7L190 304 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 PARS2Q7L3T8 475 aaKnown RBP13.68□□□□□ -0.22
TRAF4-210ENST00000475329 TAS2R42Q7RTR8 314 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 SNX20Q7Z614 316 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 CEP97Q8IW35 865 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 TRIM42Q8IWZ5 723 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 PIANPQ8IYJ0 282 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 LRRC34Q8IZ02 419 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 CCDC63Q8NA47 563 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 BCAS4Q8TDM0 211 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 LPGAT1Q92604 370 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 TTC1Q99614 292 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 OLFM1Q99784 485 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 AARSD1Q9BTE6 412 aaKnown RBP13.68□□□□□ -0.22
TRAF4-210ENST00000475329 RABEP2Q9H5N1 569 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 FAM96AQ9H5X1 160 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 TRPV5Q9NQA5 729 aa13.68□□□□□ -0.22
TRAF4-210ENST00000475329 RAD18Q9NS91 495 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms