RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ISCA1Q9BUE6 129 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 POLR3CQ9BUI4 534 aaPredicted RBP4.49□□□□□ -1.69
CD46-213ENST00000471987 HEMGNQ9BXL5 484 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 HSF4Q9ULV5 492 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 DLGAP4Q9Y2H0 992 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 OR2W1Q9Y3N9 320 aa4.49□□□□□ -1.69
CD46-213ENST00000471987 TAF4O00268 1085 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 TBX6O95947 436 aaPredicted RBP4.48□□□□□ -1.69
CD46-213ENST00000471987 INHBAP08476 426 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 GABRB2P47870 512 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 RHBDL3P58872 404 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 ISL1P61371 349 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 SORDQ00796 357 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 ZNF234Q14588 700 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 CCDC96Q2M329 555 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 ZNF876PQ49A33 203 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 SIRPB2Q5JXA9 342 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 ZNF772Q68DY9 489 aaPredicted RBP4.48□□□□□ -1.69
CD46-213ENST00000471987 CEACAM20Q6UY09 585 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 MYPOPQ86VE0 399 aaPredicted RBP4.48□□□□□ -1.69
CD46-213ENST00000471987 PIGTQ969N2 578 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 TRIM63Q969Q1 353 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 C17orf77Q96MU5 243 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 FAM110AQ9BQ89 295 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 TTYH1Q9H313 450 aaPredicted RBP4.48□□□□□ -1.69
CD46-213ENST00000471987 PLEKHA4Q9H4M7 779 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 TMEM160Q9NX00 188 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 PCDHGB3Q9Y5G1 929 aa4.48□□□□□ -1.69
CD46-213ENST00000471987 SEC14L5O43304 696 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 PCDH7O60245 1069 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 NBNO60934 754 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 TCEA3O75764 348 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 ALDH4A1P30038 563 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 NAE1Q13564 534 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 NAA35Q5VZE5 725 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 ARHGAP17Q68EM7 881 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 TTI2Q6NXR4 508 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 CADM4Q8NFZ8 388 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 ZNF524Q96C55 264 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 SLC41A2Q96JW4 573 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 ZSCAN31Q96LW9 406 aaPredicted RBP4.47□□□□□ -1.69
CD46-213ENST00000471987 QRFPRQ96P65 431 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 NEURL2Q9BR09 285 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 RIC8AQ9NPQ8 531 aa4.47□□□□□ -1.69
CD46-213ENST00000471987 TEX13CA0A0J9YWL9 993 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 KRT5P13647 590 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 CSNK2A1P68400 391 aaPredicted RBP4.46□□□□□ -1.7
CD46-213ENST00000471987 FOXM1Q08050 763 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 DUS1LQ6P1R4 473 aaKnown RBP4.46□□□□□ -1.7
CD46-213ENST00000471987 SLC27A1Q6PCB7 646 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 SLC46A3Q7Z3Q1 461 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 PCDH20Q8N6Y1 951 aaKnown RBP4.46□□□□□ -1.7
CD46-213ENST00000471987 ZNF248Q8NDW4 579 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 CSNK2A3Q8NEV1 391 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 DBF4BQ8NFT6 615 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 ZCCHC10Q8TBK6 192 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 SCRN2Q96FV2 425 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 ST6GAL2Q96JF0 529 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 IFIH1Q9BYX4 1025 aaKnown RBP4.46□□□□□ -1.7
CD46-213ENST00000471987 TKTL2Q9H0I9 626 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 SLC25A10Q9UBX3 287 aaPredicted RBP4.46□□□□□ -1.7
CD46-213ENST00000471987 A4GNTQ9UNA3 340 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 UTYO14607 1347 aa4.46□□□□□ -1.7
CD46-213ENST00000471987 BLOC1S5-TXNDC5H3BN57 136 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 ZNHIT1O43257 154 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 HOXB5P09067 269 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 COX7A2P14406 83 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 FASLGP48023 281 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 CCR5P51681 352 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 UFM1P61960 85 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 TMEM35AQ53FP2 167 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 FRG2Q64ET8 278 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 BRAT1Q6PJG6 821 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 HERVK_113Q902F9 699 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 UPF2Q9HAU5 1272 aaKnown RBP4.45□□□□□ -1.7
CD46-213ENST00000471987 MAP3K20Q9NYL2 800 aaKnown RBP4.45□□□□□ -1.7
CD46-213ENST00000471987 COMMD10Q9Y6G5 202 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 SCINQ9Y6U3 715 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 PTPRCP08575 1304 aa4.45□□□□□ -1.7
CD46-213ENST00000471987 IGLV5-45A0A087WSX0 123 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 IGKV3D-20A0A0C4DH25 116 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 FTCDO95954 541 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 IGHV4-39P01824 125 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 IFIT1P09914 478 aaKnown RBP4.44□□□□□ -1.7
CD46-213ENST00000471987 POLR2CP19387 275 aaPredicted RBP4.44□□□□□ -1.7
CD46-213ENST00000471987 PPFIA1Q13136 1202 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 SFMBT2Q5VUG0 894 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 FAM171BQ6P995 826 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 ADAD2Q8NCV1 583 aaKnown RBP4.44□□□□□ -1.7
CD46-213ENST00000471987 ORAI1Q96D31 301 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 ZNF354BQ96LW1 612 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 PCYT2Q99447 389 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 PPP1R14DQ9NXH3 145 aa4.44□□□□□ -1.7
CD46-213ENST00000471987 COL2A1P02458 1487 aaPredicted RBP4.43□□□□□ -1.7
CD46-213ENST00000471987 CTAGE9A4FU28 777 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 TTC36A6NLP5 189 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 SPINT2O43291 252 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 SYNGR3O43761 229 aa4.43□□□□□ -1.7
CD46-213ENST00000471987 LDHAP00338 332 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms