RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 DDIT4Q9NX09 232 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 BTRCQ9Y297 605 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 ST14Q9Y5Y6 855 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 ACTL7AQ9Y615 435 aa12.52□□□□□ -0.41
UBR4-210ENST00000466969 AKAP6Q13023 2319 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 K7ELQ4 463 aaPredicted RBP12.51□□□□□ -0.41
UBR4-210ENST00000466969 RECQL5O94762 991 aaPredicted RBP12.51□□□□□ -0.41
UBR4-210ENST00000466969 C9P02748 559 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 CEACAM5P06731 702 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 KLK3P07288 261 aaPredicted RBP12.51□□□□□ -0.41
UBR4-210ENST00000466969 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 GCLMP48507 274 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 PCOLCEQ15113 449 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 HIF1AQ16665 826 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 ACBD4Q8NC06 268 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 TGM7Q96PF1 710 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 TREX2Q9BQ50 279 aaPredicted RBP12.51□□□□□ -0.41
UBR4-210ENST00000466969 ZNF559Q9BR84 538 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 LRRC27Q9C0I9 530 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 SARS2Q9NP81 518 aaKnown RBP12.51□□□□□ -0.41
UBR4-210ENST00000466969 WASH6PQ9NQA3 447 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 PHPT1Q9NRX4 125 aaPredicted RBP12.51□□□□□ -0.41
UBR4-210ENST00000466969 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 CNTRLQ7Z7A1 2325 aa12.51□□□□□ -0.41
UBR4-210ENST00000466969 ILVBLA1L0T0 632 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 FOXO6A8MYZ6 492 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 M0QYV0 167 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 HAX1O00165 279 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 CPNE3O75131 537 aaKnown RBP12.5□□□□□ -0.41
UBR4-210ENST00000466969 FUCA1P04066 466 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 DNASE1P24855 282 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 GEMIN4P57678 1058 aaKnown RBP12.5□□□□□ -0.41
UBR4-210ENST00000466969 PITX1P78337 314 aaPredicted RBP12.5□□□□□ -0.41
UBR4-210ENST00000466969 RBPJQ06330 500 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 TUBB3Q13509 450 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 EIF4EBP2Q13542 120 aaPredicted RBP12.5□□□□□ -0.41
UBR4-210ENST00000466969 KNOP1Q1ED39 458 aaKnown RBP12.5□□□□□ -0.41
UBR4-210ENST00000466969 CES4AQ5XG92 561 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 PNCKQ6P2M8 343 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 LCLAT1Q6UWP7 414 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 ZNF783Q6ZMS7 281 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 TBC1D10AQ9BXI6 508 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 CHST8Q9H2A9 424 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 PCDH12Q9NPG4 1184 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 ST6GALNAC2Q9UJ37 374 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 KIAA1257Q9ULG3 409 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 EDARQ9UNE0 448 aa12.5□□□□□ -0.41
UBR4-210ENST00000466969 NCOA6Q14686 2063 aaPredicted RBP12.5□□□□□ -0.41
UBR4-210ENST00000466969 PAGE1O75459 146 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 UNC5CO95185 931 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 LY6G6DO95868 133 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 IGHEP01854 428 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 TDGF1P3P51864 188 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 CDK17Q00537 523 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 TLR1Q15399 786 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 UGP2Q16851 508 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 C1orf220Q5T0J3 134 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 ATXN7L2Q5T6C5 722 aaPredicted RBP12.49□□□□□ -0.41
UBR4-210ENST00000466969 TMCO4Q5TGY1 634 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 FAM69BQ5VUD6 431 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 LRRC31Q6UY01 552 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 SLC9B2Q86UD5 537 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 BPHLQ86WA6 291 aaPredicted RBP12.49□□□□□ -0.41
UBR4-210ENST00000466969 SLC9A9Q8IVB4 645 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 VOPP1Q96AW1 172 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 EEF2KMTQ96G04 330 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 MAGEB10Q96LZ2 347 aaPredicted RBP12.49□□□□□ -0.41
UBR4-210ENST00000466969 IP6K3Q96PC2 410 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 NLNQ9BYT8 704 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 GPAMQ9HCL2 828 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 ST7Q9NRC1 585 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 CNOT8Q9UFF9 292 aaKnown RBP12.49□□□□□ -0.41
UBR4-210ENST00000466969 CUBNO60494 3623 aa12.49□□□□□ -0.41
UBR4-210ENST00000466969 CFAP69A5D8W1 941 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 DRGXA6NNA5 263 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 CD160O95971 181 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 OTX2P32243 289 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 NASPP49321 788 aaPredicted RBP12.48□□□□□ -0.41
UBR4-210ENST00000466969 NEK4P51957 841 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 ANAPC15P60006 121 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 YWHAZP63104 245 aaKnown RBP12.48□□□□□ -0.41
UBR4-210ENST00000466969 PRKD1Q15139 912 aaPredicted RBP12.48□□□□□ -0.41
UBR4-210ENST00000466969 CFAP58Q5T655 872 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 CACHD1Q5VU97 1274 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 NR4A3Q92570 626 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 ARHGEF2Q92974 986 aaKnown RBP12.48□□□□□ -0.41
UBR4-210ENST00000466969 GDAP1L1Q96MZ0 367 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 OR2M4Q96R27 311 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 PANK2Q9BZ23 570 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 FRMD8Q9BZ67 464 aaPredicted RBP12.48□□□□□ -0.41
UBR4-210ENST00000466969 DMAC2Q9NW81 257 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 MPP6Q9NZW5 540 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 MAPK8IP1Q9UQF2 711 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 FRMD4BQ9Y2L6 1034 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 HIVEP2P31629 2446 aa12.48□□□□□ -0.41
UBR4-210ENST00000466969 CXorf51AA0A1B0GTR3 108 aa12.47□□□□□ -0.41
UBR4-210ENST00000466969 PEX12O00623 359 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms