RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 NRSN1Q8IZ57 195 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 MINDY1Q8N5J2 469 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 OR4K2Q8NGD2 314 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 CPT1BQ92523 772 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 RUNDC3BQ96NL0 473 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 SPATA16Q9BXB7 569 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 GAREM1Q9H706 876 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 SUDS3Q9H7L9 328 aaPredicted RBP20.19■□□□□ 0.82
NUP43-205ENST00000463048 ARNT2Q9HBZ2 717 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 CASS4Q9NQ75 786 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 GDF3Q9NR23 364 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 PKP3Q9Y446 797 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 MRFAP1Q9Y605 127 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 PCDH15Q96QU1 1955 aa20.19■□□□□ 0.82
NUP43-205ENST00000463048 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.18■□□□□ 0.82
NUP43-205ENST00000463048 C2orf81A6NN90 581 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 TMEM63AO94886 807 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 LPOP22079 712 aaPredicted RBP20.18■□□□□ 0.82
NUP43-205ENST00000463048 CRADDP78560 199 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 MSLNQ13421 630 aaPredicted RBP20.18■□□□□ 0.82
NUP43-205ENST00000463048 TCEA2Q15560 299 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 UAP1L1Q3KQV9 507 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 DOK6Q6PKX4 331 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 TRIM74Q86UV6 250 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 IQCHQ86VS3 1027 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 HEATR4Q86WZ0 1026 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 OR13C4Q8NGS5 318 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 BRSK1Q8TDC3 778 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 SLCO2A1Q92959 643 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 FUBP1Q96AE4 644 aaKnown RBP20.18■□□□□ 0.82
NUP43-205ENST00000463048 LGR4Q9BXB1 951 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 WDR26Q9H7D7 661 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 ARFGAP3Q9NP61 516 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 EIF2B3Q9NR50 452 aaKnown RBP20.18■□□□□ 0.82
NUP43-205ENST00000463048 MOSPD1Q9UJG1 213 aa20.18■□□□□ 0.82
NUP43-205ENST00000463048 SCN8AQ9UQD0 1980 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.17■□□□□ 0.82
NUP43-205ENST00000463048 RAD51CO43502 376 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 MAGEC1O60732 1142 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 AVILO75366 819 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 CRTAMO95727 393 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 TSHRP16473 764 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 TPSB2P20231 275 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 HMGCLP35914 325 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 DHX34Q14147 1143 aaKnown RBP20.17■□□□□ 0.82
NUP43-205ENST00000463048 TPSAB1Q15661 275 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 IZUMO3Q5VZ72 239 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 ENPP7Q6UWV6 458 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 FAM151BQ6UXP7 276 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 ZNF765Q7L2R6 523 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 RD3Q7Z3Z2 195 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 DNAJC28Q9NX36 388 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 KCTD5Q9NXV2 234 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 IL17CQ9P0M4 197 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 FKBPLQ9UIM3 349 aa20.17■□□□□ 0.82
NUP43-205ENST00000463048 EP300Q09472 2414 aaPredicted RBP20.17■□□□□ 0.82
NUP43-205ENST00000463048 FADS2P1A8MWK0 482 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 CACNB4O00305 520 aaPredicted RBP20.16■□□□□ 0.82
NUP43-205ENST00000463048 GPR39O43194 453 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 LDB2O43679 373 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 SDC3O75056 442 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 SOD1P00441 154 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 MGAT1P26572 445 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 DPTQ07507 201 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 OVGP1Q12889 678 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 FZD2Q14332 565 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 DNTTIP2Q5QJE6 756 aaKnown RBP20.16■□□□□ 0.82
NUP43-205ENST00000463048 HENMT1Q5T8I9 393 aaKnown RBP20.16■□□□□ 0.82
NUP43-205ENST00000463048 ZNF534Q76KX8 674 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 TSACCQ96A04 125 aaPredicted RBP20.16■□□□□ 0.82
NUP43-205ENST00000463048 DNAJC1Q96KC8 554 aaKnown RBP20.16■□□□□ 0.82
NUP43-205ENST00000463048 DPH5Q9H2P9 285 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 TMEM9BQ9NQ34 198 aa20.16■□□□□ 0.82
NUP43-205ENST00000463048 RGSL1A5PLK6 1076 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 C4orf47A7E2U8 309 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 EFCAB8A8MWE9 144 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 DNALI1O14645 258 aaPredicted RBP20.15■□□□□ 0.82
NUP43-205ENST00000463048 CER1O95813 267 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 SPAM1P38567 509 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 YPEL5P62699 121 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 CDK3Q00526 305 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 NFATC4Q14934 902 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 CHRNA6Q15825 494 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 ZNF648Q5T619 568 aaPredicted RBP20.15■□□□□ 0.82
NUP43-205ENST00000463048 KCTD16Q68DU8 428 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 IL27RAQ6UWB1 636 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 SYDE1Q6ZW31 735 aaPredicted RBP20.15■□□□□ 0.82
NUP43-205ENST00000463048 ZNF572Q7Z3I7 529 aaPredicted RBP20.15■□□□□ 0.82
NUP43-205ENST00000463048 PPIL6Q8IXY8 311 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 GPR161Q8N6U8 529 aaKnown RBP20.15■□□□□ 0.82
NUP43-205ENST00000463048 ZDHHC5Q9C0B5 715 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 IL26Q9NPH9 171 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 PHPT1Q9NRX4 125 aaPredicted RBP20.15■□□□□ 0.82
NUP43-205ENST00000463048 RAD18Q9NS91 495 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 TMEM98Q9Y2Y6 226 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 SNX24Q9Y343 169 aa20.15■□□□□ 0.82
NUP43-205ENST00000463048 LAMA1P25391 3075 aa20.14■□□□□ 0.82
NUP43-205ENST00000463048 GLYATL1P3A0A0U1RQE8 302 aa20.14■□□□□ 0.81
NUP43-205ENST00000463048 SPTY2D1-AS1A0A0U1RR47 76 aa20.14■□□□□ 0.81
NUP43-205ENST00000463048 TMEM202A6NGA9 273 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms