RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ZDHHC20Q5W0Z9 365 aa22.41■■□□□ 1.18
C9orf3-209ENST00000460573 DNAAF3Q8N9W5 541 aa22.41■■□□□ 1.18
C9orf3-209ENST00000460573 C19orf43Q9BQ61 176 aa22.41■■□□□ 1.18
C9orf3-209ENST00000460573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.41■■□□□ 1.18
C9orf3-209ENST00000460573 NFKBIL1Q9UBC1 381 aaPredicted RBP22.41■■□□□ 1.18
C9orf3-209ENST00000460573 CA5BQ9Y2D0 317 aa22.41■■□□□ 1.18
C9orf3-209ENST00000460573 ANKRD6Q9Y2G4 727 aa22.41■■□□□ 1.18
C9orf3-209ENST00000460573 LRRK1Q38SD2 2015 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 POM121BA6NF01 834 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 C2orf81A6NN90 581 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 H0Y8X5 98 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 VPS41P49754 854 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 PNCKQ6P2M8 343 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 Q6ZSR6 202 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 MAATS1Q7Z4T9 603 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 TTC30BQ8N4P2 665 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 DEFB124Q8NES8 71 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 AP2M1Q96CW1 435 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 EID2BQ96D98 161 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 KRT12Q99456 494 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 ABCG8Q9H221 673 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 FAM83DQ9H4H8 585 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 CASS4Q9NQ75 786 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 PKP3Q9Y446 797 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 DOCK9Q9BZ29 2069 aa22.4■■□□□ 1.18
C9orf3-209ENST00000460573 AURKAO14965 403 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 DFNA5O60443 496 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 PCCBP05166 539 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 HOXC4P09017 264 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-209ENST00000460573 CEACAM1P13688 526 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 CSRP1P21291 193 aaKnown RBP22.39■■□□□ 1.17
C9orf3-209ENST00000460573 LPOP22079 712 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-209ENST00000460573 TRIM23P36406 574 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 ADCY8P40145 1251 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 NXPH1P58417 271 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 DCDC1P59894 354 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 FOXC1Q12948 553 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 LAMB3Q13751 1172 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 PTK2BQ14289 1009 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 INPP5AQ14642 412 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 KCNJ11Q14654 390 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 PTAR1Q7Z6K3 402 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-209ENST00000460573 PCGF5Q86SE9 256 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 JAMLQ86YT9 394 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 MINDY1Q8N5J2 469 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 OR13H1Q8NG92 308 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 OR52K1Q8NGK4 314 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 PLEKHG4BQ96PX9 1271 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 GDF3Q9NR23 364 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 GPR27Q9NS67 375 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 IL17CQ9P0M4 197 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 ASIC3Q9UHC3 531 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 MRFAP1Q9Y605 127 aa22.39■■□□□ 1.17
C9orf3-209ENST00000460573 GIPC1O14908 333 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 CTSKP43235 329 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 GRIK2Q13002 908 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 KIF19Q2TAC6 998 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 OXR1Q8N573 874 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 MNS1Q8NEH6 495 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 DTX3LQ8TDB6 740 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 CPT1BQ92523 772 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 APOOQ9BUR5 198 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 ERVMER34-1Q9H9K5 563 aa22.38■■□□□ 1.17
C9orf3-209ENST00000460573 ASCC3Q8N3C0 2202 aaKnown RBP22.38■■□□□ 1.17
C9orf3-209ENST00000460573 FAM187AA6NFU0 413 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 GOLGA8CPA6NN73 597 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 STX7O15400 261 aaKnown RBP22.37■■□□□ 1.17
C9orf3-209ENST00000460573 CER1O95813 267 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 HTR1BP28222 390 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 PMLP29590 882 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 GPR1P46091 355 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 THOP1P52888 689 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 BNC1Q01954 994 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 HENMT1Q5T8I9 393 aaKnown RBP22.37■■□□□ 1.17
C9orf3-209ENST00000460573 RAET1GQ6H3X3 334 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 LRRC8BQ6P9F7 803 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 LAYNQ6UX15 382 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 RFLNAQ6ZTI6 216 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 PPIL6Q8IXY8 311 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 PLA2G15Q8NCC3 412 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 MCUQ8NE86 351 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 SCAMP4Q969E2 229 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 RIOK2Q9BVS4 552 aaKnown RBP22.37■■□□□ 1.17
C9orf3-209ENST00000460573 CD84Q9UIB8 345 aa22.37■■□□□ 1.17
C9orf3-209ENST00000460573 SPTY2D1-AS1A0A0U1RR47 76 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 SMAPO00193 183 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 NDC80O14777 642 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 TTI1O43156 1089 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 SLC4A1P02730 911 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 BPIP17213 487 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 TPH1P17752 444 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 GRIA1P42261 906 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 NPY2RP49146 381 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 C2orf54Q08AI8 447 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 PDE1CQ14123 709 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-209ENST00000460573 PDPK2PQ6A1A2 396 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 ADAMTSL4Q6UY14 1074 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 GPR26Q8NDV2 337 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 RANBP9Q96S59 729 aa22.36■■□□□ 1.17
C9orf3-209ENST00000460573 ZSCAN5AQ9BUG6 496 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms