RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SCRN2Q96FV2 425 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 LIN37Q96GY3 246 aaPredicted RBP15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 ZNF830Q96NB3 372 aaPredicted RBP15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 TMEM74Q96NL1 305 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 ZNF670Q9BS34 389 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 GSDMCQ9BYG8 508 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 LRIT1Q9P2V4 623 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 UVRAGQ9P2Y5 699 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 ATXN7L1Q9ULK2 861 aaPredicted RBP15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 A0A1W2PQM1 296 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 PLD2O14939 933 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 CBFA2T2O43439 604 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 NOBOXO60393 691 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 PROSCO94903 275 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 ITGA2BP08514 1039 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 KRT7P08729 469 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 TPM1P09493 284 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 JMJD7P0C870 316 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 IL4RP24394 825 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 DSC2Q02487 901 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 GALNT2Q10471 571 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 EIF3IQ13347 325 aaKnown RBP15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 PDK2Q15119 407 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 IFI16Q16666 785 aaKnown RBP15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 MAP9Q49MG5 647 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 LRRC66Q68CR7 880 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 SLC30A9Q6PML9 568 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 CLEC14AQ86T13 490 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 CPNE8Q86YQ8 564 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 SFTPA2Q8IWL1 248 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 AP2M1Q96CW1 435 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 MCCC1Q96RQ3 725 aaPredicted RBP15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 PACSIN1Q9BY11 444 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 TEX101Q9BY14 249 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 ZMYND15Q9H091 742 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 RBM22Q9NW64 420 aaKnown RBP eCLIP15.71■□□□□ 0.111e-7■■■■■ 41.1
CHCHD3-204ENST00000457942 ZNHIT6Q9NWK9 470 aaKnown RBP15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 SUFUQ9UMX1 484 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 RNF215Q9Y6U7 377 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 TEX15Q9BXT5 2789 aa15.71■□□□□ 0.11
CHCHD3-204ENST00000457942 A0A0U1RQS6 177 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 RHPN2P1A8MT19 583 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 MATN3O15232 486 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 AKR1B10O60218 316 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 PDHA1P08559 390 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 CCNB1P14635 433 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 SLC5A2P31639 672 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 MLLT3P42568 568 aaPredicted RBP15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 PPM1FP49593 454 aaPredicted RBP15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 MAZP56270 477 aaKnown RBP15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 TAS2R40P59535 323 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 CYP4F2P78329 520 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 TRIM14Q14142 442 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 PAFAH1B3Q15102 231 aaKnown RBP15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 SLC18A3Q16572 532 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 PHF19Q5T6S3 580 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 SPRED1Q7Z699 444 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 TEX26Q8N6G2 289 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 CCNYQ8ND76 341 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 LPCAT1Q8NF37 534 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 FAM71BQ8TC56 605 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 ZDHHC1Q8WTX9 485 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 LRRN4Q8WUT4 740 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 PIH1D2Q8WWB5 315 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 SGF29Q96ES7 293 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 FRMD8Q9BZ67 464 aaPredicted RBP15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 PISDQ9UG56 409 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 LCMT1Q9UIC8 334 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 APPL1Q9UKG1 709 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 CHKBQ9Y259 395 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 LOXL2Q9Y4K0 774 aa15.7■□□□□ 0.1
CHCHD3-204ENST00000457942 A0A0J9YYE9 177 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 ZW10O43264 779 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 NUDT21O43809 227 aaKnown RBP15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 TRBC1P01850 177 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 CEACAM5P06731 702 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 ZNF30P17039 623 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 MX2P20592 715 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 CES1P23141 567 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 AK4P27144 223 aaPredicted RBP15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 UGT1A5P35504 534 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 POLD2P49005 469 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 ARSEP51690 589 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 PEX6Q13608 980 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 HLTFQ14527 1009 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 MESDQ14696 234 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 AMZ1Q400G9 498 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 ODF2Q5BJF6 829 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 OGFOD3Q6PK18 319 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 MAML1Q92585 1016 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 SMIM14Q96QK8 99 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 ANP32EQ9BTT0 268 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 TDRD1Q9BXT4 1180 aaKnown RBP15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 CDH19Q9H159 772 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 STARD5Q9NSY2 213 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 SPATS2LQ9NUQ6 558 aaKnown RBP15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 TRNAU1APQ9NX07 287 aaKnown RBP15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 TAAR2Q9P1P5 351 aa15.69■□□□□ 0.1
CHCHD3-204ENST00000457942 DNPEPQ9ULA0 475 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms