RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 VPS16Q9H269 839 aa14.24□□□□□ -0.13
LYSMD3-202ENST00000453259 DAPK3O43293 454 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 FUCA1P04066 466 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 CCDC172P0C7W6 258 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 AK4P27144 223 aaPredicted RBP14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 RPL7AP62424 266 aaKnown RBP14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 ZNF235Q14590 738 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 LBRQ14739 615 aaKnown RBP14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 DPCR1Q3MIW9 517 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 ERMARDQ5T6L9 678 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 RAET1GQ6H3X3 334 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 ARHGAP12Q8IWW6 846 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 PELI3Q8N2H9 469 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 STARD8Q92502 1023 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 MIB2Q96AX9 1013 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 ABHD17AQ96GS6 310 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 NUDCD1Q96RS6 583 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 SLC38A3Q99624 504 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 SARS2Q9NP81 518 aaKnown RBP14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 FAM207AQ9NSI2 230 aaPredicted RBP14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 OCIAD1Q9NX40 245 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 DNPEPQ9ULA0 475 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 PPIL1Q9Y3C6 166 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 TEX15Q9BXT5 2789 aa14.23□□□□□ -0.13
LYSMD3-202ENST00000453259 NKX2-8O15522 239 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 RECKO95980 971 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 ANKRD34CP0C6C1 535 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 ATP1A3P13637 1013 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 ZNF30P17039 623 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 TCN2P20062 427 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 ETV3P41162 512 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 IGFBP7Q16270 282 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 NKAIN2Q5VXU1 208 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 TCTN3Q6NUS6 607 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 GALNT13Q8IUC8 556 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 PATE1Q8WXA2 126 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 DHX35Q9H5Z1 703 aaKnown RBP14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 PARVAQ9NVD7 372 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 VPS18Q9P253 973 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 PCDHB3Q9Y5E6 796 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 ST14Q9Y5Y6 855 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 RELNP78509 3460 aa14.22□□□□□ -0.13
LYSMD3-202ENST00000453259 NBASA2RRP1 2371 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 PRR19A6NJB7 356 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 MKRN2OSH3BPM6 223 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 DFFAO00273 331 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 TOX3O15405 576 aaPredicted RBP14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 STK17BO94768 372 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 DLGAP3O95886 979 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 ERCC2P18074 760 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 STAT5AP42229 794 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 GPR1P46091 355 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 HHEXQ03014 270 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 PYCR3Q53H96 274 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 HSP90AA4PQ58FG1 418 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 Q6ZVL8 140 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 KDELC2Q7Z4H8 507 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 HSD11B1LQ7Z5J1 315 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 TECPR1Q7Z6L1 1165 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 SLC37A2Q8TED4 501 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 FNIP1Q8TF40 1166 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 MGME1Q9BQP7 344 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 HERPUD2Q9BSE4 406 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 CLSTN2Q9H4D0 955 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 ZWILCHQ9H900 591 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 RMI1Q9H9A7 625 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 LRRC4CQ9HCJ2 640 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 NLRC4Q9NPP4 1024 aa14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 ZNF71Q9NQZ8 489 aaPredicted RBP14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 SAMSN1Q9NSI8 373 aaKnown RBP14.21□□□□□ -0.13
LYSMD3-202ENST00000453259 ZFC3H1O60293 1989 aaKnown RBP14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 KIR2DS5A0A0G2JLQ3 304 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 A0A0G2JNG1 304 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 LOC101059948A0A1B0GTJ6 334 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 NPIPB15A6NHN6 443 aaPredicted RBP14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 OR5K4A6NMS3 321 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 A8MX80 341 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 KIR2DS3K7RE56 304 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 POLR1CO15160 346 aaPredicted RBP14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 PRPSAP2O60256 369 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 RNF8O76064 485 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 PGLSO95336 258 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 PRKAR1AP10644 381 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 LHCGRP22888 699 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 OAS2P29728 719 aaKnown RBP14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 SLC10A7Q0GE19 358 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 KIR2DS5Q14953 304 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 C4orf17Q53FE4 359 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 ARMC12Q5T9G4 340 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 CYB5D1Q6P9G0 228 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 PLXDC1Q8IUK5 500 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 MCOLN2Q8IZK6 566 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 NPWQ8N729 165 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 EXD1Q8NHP7 514 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 PDCD6IPQ8WUM4 868 aaKnown RBP14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 NSMCE1Q8WV22 266 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 SEC14L1Q92503 715 aa14.2□□□□□ -0.14
LYSMD3-202ENST00000453259 AP2M1Q96CW1 435 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms