RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 SPASTQ9UBP0 616 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 PCYOX1Q9UHG3 505 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 AMACRQ9UHK6 382 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 U3KQA8 63 aa17.06■□□□□ 0.32
PRPF40A-204ENST00000450303 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 RECQL5O94762 991 aaPredicted RBP17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 ECEL1O95672 775 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 CELA2BP08218 269 aaPredicted RBP17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 ELFN1P0C7U0 828 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 CR2P20023 1033 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 HSPA9P38646 679 aaKnown RBP17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 MMP13P45452 471 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 KCNJ1P48048 391 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 IFI35P80217 286 aaPredicted RBP17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 PPARDQ03181 441 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 TRAF2Q12933 501 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 PTPRRQ15256 657 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 CDKN3Q16667 212 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 GLIPR1L2Q4G1C9 344 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 ENPP7Q6UWV6 458 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 C4orf22Q6V702 233 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 SYDE1Q6ZW31 735 aaPredicted RBP17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 DPPA4Q7L190 304 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 HID1Q8IV36 788 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 KRT12Q99456 494 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 IL12RB2Q99665 862 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 LRRC61Q9BV99 259 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 DUSP23Q9BVJ7 150 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 SLC13A1Q9BZW2 595 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 B4GALT6Q9UBX8 382 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 TRHDEQ9UKU6 1024 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 RAXQ9Y2V3 346 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 CSNK1G3Q9Y6M4 447 aa17.05■□□□□ 0.32
PRPF40A-204ENST00000450303 CPED1A4D0V7 1026 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 TOR1BO14657 336 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 CPP00450 1065 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 TSHRP16473 764 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 GM2AP17900 193 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 E2F1Q01094 437 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 DR1Q01658 176 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 ITKQ08881 620 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 ACOX1Q15067 660 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 PPP1R7Q15435 360 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 ALG11Q2TAA5 492 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 P3H1Q32P28 736 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 TEX44Q53QW1 395 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 DENND2CQ68D51 928 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 ITPRIPL1Q6GPH6 555 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 C19orf48Q6RUI8 117 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 B4GALNT4Q76KP1 1039 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 PID1Q7Z2X4 250 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 MMGT1Q8N4V1 131 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 FAM71DQ8N9W8 422 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 FAM181AQ8N9Y4 354 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 CCHCR1Q8TD31 782 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 MGME1Q9BQP7 344 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 CLPBQ9H078 707 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 USP29Q9HBJ7 922 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 ARFGAP3Q9NP61 516 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 RBM22Q9NW64 420 aaKnown RBP eCLIP17.04■□□□□ 0.321e-9■■■■■ 40.4
PRPF40A-204ENST00000450303 KLHL8Q9P2G9 620 aaPredicted RBP17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 CLCA2Q9UQC9 943 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 DMXL2Q8TDJ6 3036 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 ASXL3Q9C0F0 2248 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 WDFY3Q8IZQ1 3526 aa17.04■□□□□ 0.32
PRPF40A-204ENST00000450303 ZZEF1O43149 2961 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 CCDC151A5D8V7 595 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 C5orf60A6NFR6 353 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 FAM187AA6NFU0 413 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 KCNK1O00180 336 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 HTRA2O43464 458 aaPredicted RBP17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 OPA1O60313 960 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 MT-CO3P00414 261 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 IFNB1P01574 187 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 JCHAINP01591 159 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 ANXA6P08133 673 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 PTPN3P26045 913 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 DUSP3P51452 185 aaPredicted RBP17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 NFATC4Q14934 902 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 AGERQ15109 404 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 KCTD16Q68DU8 428 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 ZCCHC8Q6NZY4 707 aaKnown RBP17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 TTC27Q6P3X3 843 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 GUSBP11Q6P575 273 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 CRTC1Q6UUV9 634 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 PELI3Q8N2H9 469 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 TEX26Q8N6G2 289 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 IFI44Q8TCB0 444 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 SLCO2A1Q92959 643 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 RTP4Q96DX8 246 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 PPP1R2P1Q96PQ5 205 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 PARD6BQ9BYG5 372 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 C10orf88Q9H8K7 445 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 PAK5Q9P286 719 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 AK5Q9Y6K8 562 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 LRP4O75096 1905 aa17.03■□□□□ 0.32
PRPF40A-204ENST00000450303 APC2O95996 2303 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 A0A0U1RQS6 177 aa17.02■□□□□ 0.32
PRPF40A-204ENST00000450303 YY2O15391 372 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms