RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PGRMC1O00264 195 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 CES2O00748 559 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 TNFP01375 233 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 ITIH2P19823 946 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 CSNK1DP48730 415 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 NDST2P52849 883 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 GALNT2Q10471 571 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 EIF3IQ13347 325 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 NOMO1Q15155 1222 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 IRF4Q15306 451 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 WSCD2Q2TBF2 565 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 LRRC73Q5JTD7 316 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 DNTTIP2Q5QJE6 756 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 CFAP58Q5T655 872 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 CLEC14AQ86T13 490 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 ZC3H18Q86VM9 953 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 HID1Q8IV36 788 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 PRELID2Q8N945 189 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 P3H4Q92791 437 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 LIN37Q96GY3 246 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 OLFM3Q96PB7 478 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 TUBGCP5Q96RT8 1024 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 LHX3Q9UBR4 397 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 PNMA8BQ9ULN7 279 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 LRRK1Q38SD2 2015 aa13.78□□□□□ -0.2
PDLIM2-213ENST00000448520 J3KR12 359 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 K7ENP7 123 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 APOC4-APOC2K7ER74 178 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 INSIG1O15503 277 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 TNFSF15O95150 251 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 APOC2P02655 101 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 TUBB4AP04350 444 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 ITGA2BP08514 1039 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 C6P13671 934 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 PLA2G2AP14555 144 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 ZFXP17010 805 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 EIF3EP60228 445 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 SRP54P61011 504 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 INPP5AQ14642 412 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 NFATC4Q14934 902 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 INO80CQ6PI98 192 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 CRTC1Q6UUV9 634 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 TSACCQ96A04 125 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 ARHGEF17Q96PE2 2063 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 STRADBQ9C0K7 418 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 PCDH12Q9NPG4 1184 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 RRAGDQ9NQL2 400 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 CDC23Q9UJX2 597 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 TTC7AQ9ULT0 858 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 GPR34Q9UPC5 381 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 MRFAP1Q9Y605 127 aa13.77□□□□□ -0.21
PDLIM2-213ENST00000448520 ARHGAP42A6NI28 874 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 H7C0C1 242 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 PRAMEF11O60813 436 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 PIGNO95427 931 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 HOXC4P09017 264 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 SERPINB6P35237 376 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 GARSP41250 739 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 ATP5OP48047 213 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 POLR2LP62875 67 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 NSUN2Q08J23 767 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 MTM1Q13496 603 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 ALG11Q2TAA5 492 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 FOXR1Q6PIV2 292 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 RD3Q7Z3Z2 195 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 FBXO39Q8N4B4 442 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 ATPAF2Q8N5M1 289 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 LZTR1Q8N653 840 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 SLC35B2Q8TB61 432 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 TTC9Q92623 222 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 WDR92Q96MX6 357 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 TMEM74Q96NL1 305 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 GFM1Q96RP9 751 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 CEP41Q9BYV8 373 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 PDFQ9HBH1 243 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 KLQ9UEF7 1012 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 DNPEPQ9ULA0 475 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 ATP8A1Q9Y2Q0 1164 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 COQ6Q9Y2Z9 468 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 PCDHGA7Q9Y5G6 932 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 DGKBQ9Y6T7 804 aa13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 COL27A1Q8IZC6 1860 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-213ENST00000448520 ZNF462Q96JM2 2506 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 PLD2O14939 933 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 LIASO43766 372 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 MAFKO60675 156 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 PNLIPP16233 465 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 KELP23276 732 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 SERPINA4P29622 427 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 KCNJ1P48048 391 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 LIG3P49916 1009 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 RFTN1Q14699 578 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 TTC27Q6P3X3 843 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 OGFOD3Q6PK18 319 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 CCDC81Q6ZN84 652 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 SRLQ86TD4 932 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 PRUNE1Q86TP1 453 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms