RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PCID2Q5JVF3 399 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 TEX35Q5T0J7 233 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ARMC3Q5W041 872 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PMS2CLQ68D20 193 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ZC3H14Q6PJT7 736 aaKnown RBP7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ZDHHC24Q6UX98 284 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 Q6ZVL8 140 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 CEP68Q76N32 757 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 NLRP9Q7RTR0 991 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 CYP2U1Q7Z449 544 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 NLRP8Q86W28 1048 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 IFT20Q8IY31 132 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 NRSN1Q8IZ57 195 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PDIK1LQ8N165 341 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 AGGF1Q8N302 714 aaeCLIP7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 MPP5Q8N3R9 675 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ZCCHC9Q8N567 271 aaKnown RBP7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 FBXO25Q8TCJ0 367 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 IFT81Q8WYA0 676 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 DNASE2BQ8WZ79 361 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 SIGLEC10Q96LC7 697 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PWWP2AQ96N64 755 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 RANBP9Q96S59 729 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 C19orf43Q9BQ61 176 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ORAI3Q9BRQ5 295 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 KIFC1Q9BW19 673 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 C1QTNF7Q9BXJ2 289 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 IRF2BPLQ9H1B7 796 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 KCNH6Q9H252 994 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ALG2Q9H553 416 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 BPIFA1Q9NP55 256 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 GDF3Q9NR23 364 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 CHRAC1Q9NRG0 131 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 FAM114A2Q9NRY5 505 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 ZDHHC18Q9NUE0 388 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 KCTD5Q9NXV2 234 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 IL17CQ9P0M4 197 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PKP3Q9Y446 797 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 R4GN57 208 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 KMT2EQ8IZD2 1858 aa7.53□□□□□ -1.2
AC004540.1-206ENST00000448056 PRAMEF26H0Y7S4 382 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 STX7O15400 261 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 SLC4A1P02730 911 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 BPIP17213 487 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 ITPKAP23677 461 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 MAOBP27338 520 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 DHPSP49366 369 aaPredicted RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 CARSP49589 748 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 ZNF140P52738 457 aaPredicted RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 ARL4CP56559 192 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 DPTQ07507 201 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 DHX9Q08211 1270 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 CUL1Q13616 776 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 SEPT6Q14141 434 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 LRRC14Q15048 493 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 ELF2Q15723 593 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 HIF1AQ16665 826 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 SKIDA1Q1XH10 827 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 BBS9Q3SYG4 887 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 DNAJC21Q5F1R6 531 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 WDR45BQ5MNZ6 344 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 TSTD2Q5T7W7 516 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 ZDHHC20Q5W0Z9 365 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 LYSMD4Q5XG99 296 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 CASC4Q6P4E1 433 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 IGDCC3Q8IVU1 814 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 GPR26Q8NDV2 337 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 PPHLN1Q8NEY8 458 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 OR4K2Q8NGD2 314 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 C1orf216Q8TAB5 229 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 FAM174AQ8TBP5 190 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 STYXQ8WUJ0 223 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 SNX19Q92543 992 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 SCAMP4Q969E2 229 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 NUS1Q96E22 293 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 DTD2Q96FN9 168 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 SERAC1Q96JX3 654 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 HSPA12BQ96MM6 686 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 ZNF778Q96MU6 729 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 CDK15Q96Q40 435 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 KLF6Q99612 283 aaPredicted RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 EBNA1BP2Q99848 306 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 FAM129AQ9BZQ8 928 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 FOXP3Q9BZS1 431 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 CDH19Q9H159 772 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 ABCG8Q9H221 673 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 EPC1Q9H2F5 836 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 FAM83DQ9H4H8 585 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 MRM3Q9HC36 420 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 IL26Q9NPH9 171 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 MBNL1Q9NR56 388 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 NLE1Q9NVX2 485 aaPredicted RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 SYBUQ9NX95 663 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 PKD2L2Q9NZM6 624 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 EIF2B4Q9UI10 523 aaKnown RBP7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 CD84Q9UIB8 345 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 RIMKLBQ9ULI2 386 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 SOX13Q9UN79 622 aa7.52□□□□□ -1.21
AC004540.1-206ENST00000448056 DMTF1Q9Y222 760 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms