RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SEMA5AQ13591 1074 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 TRIM71Q2Q1W2 868 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 KCTD4Q8WVF5 259 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 PNMA8BQ9ULN7 279 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 SOX13Q9UN79 622 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 ADH1BP00325 375 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 KRT16P08779 473 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 C9orf50Q5SZB4 431 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 RNASEH2BQ5TBB1 312 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 CHST15Q7LFX5 561 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 SCD5Q86SK9 330 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 IFNEQ86WN2 208 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 TMEM25Q86YD3 366 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 ACMSDQ8TDX5 336 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 ZNF473Q8WTR7 871 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 TMEM174Q8WUU8 243 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 SLC24A3Q9HC58 644 aa14.08□□□□□ -0.16
SMARCA4-204ENST00000444061 GRIA4P48058 902 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ALDH9A1P49189 494 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ANXA11P50995 505 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 FBXO43Q4G163 708 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 XKR4Q5GH76 650 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ANKRD22Q5VYY1 191 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 FOXR1Q6PIV2 292 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 TMEM173Q86WV6 379 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 CMTM5Q96DZ9 223 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 TCF12Q99081 682 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 POLR3BQ9NW08 1133 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 POLG2Q9UHN1 485 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ADAMTSL1Q8N6G6 1762 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 H3BNC9 293 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 METTL18O95568 372 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 PLOD1Q02809 727 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 CNTN1Q12860 1018 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 LDLRAP1Q5SW96 308 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 TMEM220Q6QAJ8 160 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 KIAA0408Q6ZU52 694 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 CFAP206Q8IYR0 622 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 TEX9Q8N6V9 391 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 PHC3Q8NDX5 983 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 PGM2Q96G03 612 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 YIPF3Q9GZM5 350 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ECT2Q9H8V3 914 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 TULP3O75386 442 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ATP5F1P24539 256 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 IRAK1P51617 712 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 IFI35P80217 286 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 MSLNQ13421 630 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 C1orf146Q5VVC0 180 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 KLHDC10Q6PID8 442 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 UBE2R2Q712K3 238 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ARMCX6Q7L4S7 300 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 LDB1Q86U70 411 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 TRMT2BQ96GJ1 504 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 CRISPLD2Q9H0B8 497 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 SEMA4BQ9NPR2 832 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 LOC100653049A0A140TA62 436 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 TTC24A2A3L6 582 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 AIM2O14862 343 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 SLC7A4O43246 635 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 KRT34O76011 436 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 GOT2P00505 430 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ANXA6P08133 673 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ALPIP09923 528 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 VIPR1P32241 457 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ACSM2AQ08AH3 577 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ACSM2BQ68CK6 577 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 KDM7AQ6ZMT4 941 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 UMODL1-AS1Q8N2C9 162 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 CDH19Q9H159 772 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 SELENONQ9NZV5 590 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 COLEC10Q9Y6Z7 277 aa14.07□□□□□ -0.16
SMARCA4-204ENST00000444061 ATP6AP1LQ52LC2 224 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 ZMIZ2Q8NF64 920 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 TCEAL4Q96EI5 215 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 ZNF514Q96K75 400 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 NELL2Q99435 816 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 GGT7Q9UJ14 662 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 GOLGA4Q13439 2230 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 FAM72CH0Y354 149 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 SCAMP1O15126 338 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 SH3BGRLO75368 114 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 WDR45BQ5MNZ6 344 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 SNAP47Q5SQN1 464 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 FAM72AQ5TYM5 149 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 KIAA0319Q5VV43 1072 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 FAM72DQ6L9T8 149 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 KBTBD6Q86V97 674 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 FAM72BQ86X60 149 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 FAM3CQ92520 227 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 QRFPRQ96P65 431 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 ACAT2Q9BWD1 397 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 SLC46A2Q9BY10 475 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 CXCL16Q9H2A7 254 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 LINC00597Q9H2U6 94 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 RMND5AQ9H871 391 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 NSG1P42857 185 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 ZBTB2Q8N680 514 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 SLC43A3Q8NBI5 491 aa14.06□□□□□ -0.16
SMARCA4-204ENST00000444061 OTUB1Q96FW1 271 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms