RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 HNRNPRO43390 633 aaKnown RBP6.51□□□□□ -1.37
HDAC6-210ENST00000441703 LATO43561 262 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 PRAMEF10O60809 474 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 EDF1O60869 148 aaKnown RBP6.51□□□□□ -1.37
HDAC6-210ENST00000441703 DNAJC6O75061 913 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 SIN3BO75182 1162 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ENTPD5O75356 428 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 STAU1O95793 577 aaKnown RBP6.51□□□□□ -1.37
HDAC6-210ENST00000441703 TTC4O95801 387 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ADH1BP00325 375 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 KLKB1P03952 638 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 GOT1P17174 413 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ITIH2P19823 946 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CD82P27701 267 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 NOS2P35228 1153 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 MAPK10P53779 464 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 PTK2Q05397 1052 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 KCNA1Q09470 495 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 SF3A3Q12874 501 aaKnown RBP eCLIP6.51□□□□□ -1.375e-7■■■■□ 23.7
HDAC6-210ENST00000441703 MPP3Q13368 585 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ALCAMQ13740 583 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 MPP2Q14168 576 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 DRAP1Q14919 205 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-210ENST00000441703 LRRC14Q15048 493 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 TMEM164Q5U3C3 297 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 MBLAC2Q68D91 279 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 C3orf62Q6ZUJ4 267 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 PAQR9Q6ZVX9 377 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CCDC80Q76M96 950 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 PHLDB2Q86SQ0 1253 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 WDR49Q8IV35 697 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 GPD1LQ8N335 351 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CPXM2Q8N436 756 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ZNF276Q8N554 614 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 IL22RA1Q8N6P7 574 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ZMIZ2Q8NF64 920 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 SLC30A5Q8TAD4 765 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CPT1CQ8TCG5 803 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 C17orf50Q8WW18 174 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 JPH3Q8WXH2 748 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-210ENST00000441703 LARP4BQ92615 738 aaKnown RBP6.51□□□□□ -1.37
HDAC6-210ENST00000441703 MARVELD3Q96A59 401 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 TMEM74Q96NL1 305 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 TUBGCP5Q96RT8 1024 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 MYOCQ99972 504 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ECSITQ9BQ95 431 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CCDC3Q9BQI4 270 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CCDC77Q9BR77 488 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 FOXP3Q9BZS1 431 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 TRIM31Q9BZY9 425 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 PHACTR1Q9C0D0 580 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 MTG2Q9H4K7 406 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 RUBCNLQ9H714 662 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CSNK1G1Q9HCP0 422 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 PRDM8Q9NQV8 689 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ABCB8Q9NUT2 735 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.51□□□□□ -1.37
HDAC6-210ENST00000441703 OSER1Q9NX31 292 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 DNAJC28Q9NX36 388 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CYTH4Q9UIA0 394 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 NUDT5Q9UKK9 219 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 SCML2Q9UQR0 700 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 CA5BQ9Y2D0 317 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 TMED5Q9Y3A6 229 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 LOXL2Q9Y4K0 774 aa6.51□□□□□ -1.37
HDAC6-210ENST00000441703 ARHGAP10A1A4S6 786 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 SMIM23A6NLE4 172 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 H0Y3Z8 333 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 STMND1H3BQB6 276 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 AGRPO00253 132 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 RNGTTO60942 597 aaKnown RBP6.5□□□□□ -1.37
HDAC6-210ENST00000441703 CDH16O75309 829 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 KRT36O76013 467 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 ASMTLO95671 621 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 GAS8O95995 478 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 IL1BP01584 269 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 ABHD2P08910 425 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 TROVE2P10155 538 aaKnown RBP eCLIP6.5□□□□□ -1.37
HDAC6-210ENST00000441703 MYBL1P10243 752 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 RALAP11233 206 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 PABPC1P11940 636 aaKnown RBP6.5□□□□□ -1.37
HDAC6-210ENST00000441703 ZNF24P17028 368 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 GAP43P17677 238 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 ITIH1P19827 911 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 C5AR1P21730 350 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 HLA-FP30511 346 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 COILP38432 576 aaPredicted RBP6.5□□□□□ -1.37
HDAC6-210ENST00000441703 SLCO1A2P46721 670 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 PDX1P52945 283 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 ADARP55265 1226 aaKnown RBP6.5□□□□□ -1.37
HDAC6-210ENST00000441703 WDR4P57081 412 aaKnown RBP6.5□□□□□ -1.37
HDAC6-210ENST00000441703 COG7P83436 770 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 CDR2Q01850 454 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 SPARCL1Q14515 664 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 RASA2Q15283 850 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 PDK4Q16654 411 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 DEFB133Q30KQ1 61 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 EDRF1Q3B7T1 1238 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 MPPE1Q53F39 396 aa6.5□□□□□ -1.37
HDAC6-210ENST00000441703 HSP90AA5PQ58FG0 334 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms