RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SRRM3A6NNA2 597 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 BTBD18B2RXH4 712 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 B4E171 279 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 ATP2C2O75185 946 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 MMP10P09238 476 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 UBL4AP11441 157 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 FMO4P31512 558 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 DDIT3P35638 169 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 TSPAN7P41732 249 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 GPR12P47775 334 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 CENPAP49450 140 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 EFNA5P52803 228 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 CYP4A11Q02928 519 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 SLC18A2Q05940 514 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 DCTN2Q13561 401 aaKnown RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 MYBPC2Q14324 1141 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 TBCEQ15813 527 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 PRICKLE4Q2TBC4 344 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 PRAMEF19Q5SWL8 479 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 SERTAD4-AS1Q5TG53 156 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 Q6ZTC4 211 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 CPLX4Q7Z7G2 160 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 PATL1Q86TB9 770 aaKnown RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 KIAA2013Q8IYS2 634 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 OR14A16Q8NHC5 309 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 TDRD7Q8NHU6 1098 aaKnown RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 NFKBIDQ8NI38 313 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 RFFLQ8WZ73 363 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 HDAC2Q92769 488 aaKnown RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 KLHL29Q96CT2 875 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 MVB12BQ9H7P6 319 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 DDX31Q9H8H2 851 aaKnown RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZNF556Q9HAH1 456 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 OLA1Q9NTK5 396 aaKnown RBP3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 C20orf141Q9NUB4 165 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 PPP1R14DQ9NXH3 145 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 KCND2Q9NZV8 630 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 KIAA1456Q9P272 454 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 HSPB7Q9UBY9 170 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 AKAP12Q02952 1782 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 NHSQ6T4R5 1651 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 ADGRF5Q8IZF2 1346 aa3.42□□□□□ -1.86
HMGB3P12-201ENST00000438745 CPDO75976 1380 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 A0A096LPK6 155 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 IFITM10A6NMD0 228 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 LDLRAD4O15165 306 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 TNFSF14O43557 240 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZBTB11O95625 1053 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 SPARCP09486 303 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 MT3P25713 68 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 ITGB8P26012 769 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 EPHA8P29322 1005 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 DCTDP32321 178 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 RGS2P41220 211 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 YWHAZP63104 245 aaKnown RBP3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 PTP4A2Q12974 167 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 SIM2Q14190 667 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 PPP2R5BQ15173 497 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 PKN2Q16513 984 aaKnown RBP3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 C9orf57Q5W0N0 161 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 LRRC8EQ6NSJ5 796 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 TBC1D1Q86TI0 1168 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 TDRPQ86YL5 185 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 METTL6Q8TCB7 284 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 GPT2Q8TD30 523 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 TMEM170AQ8WVE7 144 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 SAAL1Q96ER3 474 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 ZC3HAV1LQ96H79 300 aaKnown RBP3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 BBS4Q96RK4 519 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 YME1L1Q96TA2 773 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 NPFFR1Q9GZQ6 430 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 KRT84Q9NSB2 600 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 TAS2R10Q9NYW0 307 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 LTBP1Q14766 1721 aa3.41□□□□□ -1.86
HMGB3P12-201ENST00000438745 USP47Q96K76 1375 aa3.4□□□□□ -1.86
HMGB3P12-201ENST00000438745 ALS2Q96Q42 1657 aa3.4□□□□□ -1.86
HMGB3P12-201ENST00000438745 DOCK7Q96N67 2140 aa3.4□□□□□ -1.86
HMGB3P12-201ENST00000438745 A0A1B0GVM2 712 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 CHL1O00533 1208 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 DDNO94850 711 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 SEC31AO94979 1220 aaKnown RBP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 TFPIP10646 304 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 CTPS1P17812 591 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 ABCD1P33897 745 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 MAN1A1P33908 653 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 MXI1P50539 228 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 BLKP51451 505 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 GAS1P54826 345 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 RRP1P56182 461 aaKnown RBP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 CLDN2P57739 230 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 TUBA1BP68363 451 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 RPL36AP83881 106 aaKnown RBP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 FAM27E3Q08E93 113 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 GRSF1Q12849 480 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 ILF3Q12906 894 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 CTTNQ14247 550 aaKnown RBP3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 SCN5AQ14524 2016 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 LPIN1Q14693 890 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 PLCB4Q15147 1175 aa3.4□□□□□ -1.87
HMGB3P12-201ENST00000438745 KIF19Q2TAC6 998 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms