RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 ZNF30P17039 623 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PTPN3P26045 913 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CDC25BP30305 580 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CTNNA1P35221 906 aaKnown RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NR2C2P49116 596 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DUSP3P51452 185 aaPredicted RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 STC1P52823 247 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RPL26P61254 145 aaKnown RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 INSM1Q01101 510 aaPredicted RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ADCY2Q08462 1091 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TARDBPQ13148 414 aaKnown RBP eCLIP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GALNT3Q14435 633 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PPP2R5EQ16537 467 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PCSK7Q16549 785 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CCDC181Q5TID7 509 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DOK6Q6PKX4 331 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 BZW1Q7L1Q6 419 aaKnown RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KDELC2Q7Z4H8 507 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TRIM74Q86UV6 250 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NT5DC3Q86UY8 548 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZC3H18Q86VM9 953 aaKnown RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TMEM139Q8IV31 216 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SLC35F3Q8IY50 421 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RCOR2Q8IZ40 523 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 EXD1Q8NHP7 514 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MAPK15Q8TD08 544 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 P3H4Q92791 437 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 QKIQ96PU8 341 aaKnown RBP eCLIP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RBM15Q96T37 977 aaKnown RBP eCLIP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 HEMGNQ9BXL5 484 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LACRTQ9GZZ8 138 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CCDC86Q9H6F5 360 aaKnown RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SYNDIG1Q9H7V2 258 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CARS2Q9HA77 564 aaKnown RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 USP29Q9HBJ7 922 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CYP4F12Q9HCS2 524 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NCKIPSDQ9NZQ3 722 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KLHL8Q9P2G9 620 aaPredicted RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TRIM10Q9UDY6 481 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DNPEPQ9ULA0 475 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RPL26L1Q9UNX3 145 aaKnown RBP9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CLCA2Q9UQC9 943 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DGKBQ9Y6T7 804 aa9.2□□□□□ -0.94
RFX3-AS1-202ENST00000427722 COL5A1P20908 1838 aaPredicted RBP9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 FRYQ5TBA9 3013 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SPEGQ15772 3267 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 A0A0U1RQJ8 604 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PRSS38A1L453 326 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TRABD2BA6NFA1 517 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 BTNL10A8MVZ5 291 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PDE2AO00408 941 aaPredicted RBP9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TNFRSF10CO14798 259 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 OPA1O60313 960 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PMPCBO75439 489 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CLDN7O95471 211 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TNFP01375 233 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GP1BAP07359 652 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TRIM23P36406 574 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GPR1P46091 355 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GNPDA1P46926 289 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 E2F1Q01094 437 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PTSQ03393 145 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TECPR1Q7Z6L1 1165 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TAF8Q7Z7C8 310 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GKN2Q86XP6 184 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ARL10Q8N8L6 244 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SPATA22Q8NHS9 363 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GLMNQ92990 594 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NAT6Q93015 286 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SCAMP4Q969E2 229 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 AP2M1Q96CW1 435 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NXPE2Q96DL1 559 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 IMP4Q96G21 291 aaKnown RBP9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CALR3Q96L12 384 aaKnown RBP9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 AGAP2Q99490 1192 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MLPHQ9BV36 600 aaPredicted RBP9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RIOK2Q9BVS4 552 aaKnown RBP9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 BOCQ9BWV1 1114 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TEX101Q9BY14 249 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ADGRE3Q9BY15 652 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TMEM168Q9H0V1 697 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ABCG4Q9H172 646 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SLC25A51Q9H1U9 297 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ABCG8Q9H221 673 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GLOD4Q9HC38 313 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KCTD5Q9NXV2 234 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 IMPACTQ9P2X3 320 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GULP1Q9UBP9 304 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GPR34Q9UPC5 381 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PPIL1Q9Y3C6 166 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TRPM6Q9BX84 2022 aa9.19□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CCDC66A2RUB6 948 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 B4DGG1 531 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 H7C0C1 242 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 INPP4BO15327 924 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PJA2O43164 708 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MTSS1O43312 755 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KRT37O76014 449 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms