RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 LRRN4Q8WUT4 740 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 MAML1Q92585 1016 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 GLMNQ92990 594 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 TSACCQ96A04 125 aaPredicted RBP12.72□□□□□ -0.37
SGCE-203ENST00000425444 HDAC11Q96DB2 347 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 NUS1Q96E22 293 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 TBATAQ96M53 351 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 WDR92Q96MX6 357 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 RNF157Q96PX1 679 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 EPN3Q9H201 632 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 WDR26Q9H7D7 661 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 LUC7LQ9NQ29 371 aaKnown RBP12.72□□□□□ -0.37
SGCE-203ENST00000425444 DDX56Q9NY93 547 aaKnown RBP12.72□□□□□ -0.37
SGCE-203ENST00000425444 DTLQ9NZJ0 730 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 NCKIPSDQ9NZQ3 722 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 HYOU1Q9Y4L1 999 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 ENTPD2Q9Y5L3 495 aa12.72□□□□□ -0.37
SGCE-203ENST00000425444 LY6G6EA0A0G2JKS1 128 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 GOLGA6BA6NDN3 693 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 HEXIM1O94992 359 aaKnown RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 HLA-DQB2P05538 268 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 ALPIP09923 528 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 TSHRP16473 764 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 CTPS1P17812 591 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 KELP23276 732 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 RPIAP49247 311 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 ZNF75DP51815 510 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 HK3P52790 923 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 SRP54P61011 504 aaKnown RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 DYNLT1P63172 113 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 DSC2Q02487 901 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 AP1B1Q10567 949 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 SRSF6Q13247 344 aaKnown RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 NR0B2Q15466 257 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 SPA17Q15506 151 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 TBR1Q16650 682 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 CDKN3Q16667 212 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 SKIDA1Q1XH10 827 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 LRRC38Q5VT99 294 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 RBM44Q6ZP01 1051 aaKnown RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 CCDC170Q8IYT3 715 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 FSTL5Q8N475 847 aaPredicted RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 PLD5Q8N7P1 536 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 SCG3Q8WXD2 468 aaKnown RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 SPOCK2Q92563 424 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 FATE1Q969F0 183 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 PDXPQ96GD0 296 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 TSGA13Q96PP4 275 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 RBSNQ9H1K0 784 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 AMACRQ9UHK6 382 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 MOSPD1Q9UJG1 213 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 SALL4Q9UJQ4 1053 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 PNMA8BQ9ULN7 279 aaPredicted RBP12.71□□□□□ -0.37
SGCE-203ENST00000425444 U3KQA8 63 aa12.71□□□□□ -0.37
SGCE-203ENST00000425444 CPED1A4D0V7 1026 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 NPIPB15A6NHN6 443 aaPredicted RBP12.7□□□□□ -0.38
SGCE-203ENST00000425444 ZNF487B1APH4 448 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 LMO7DNF2Z398 122 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 KCNK1O00180 336 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 PSMD11O00231 422 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 TPP1O14773 563 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 PPP1R12AO14974 1030 aaPredicted RBP12.7□□□□□ -0.38
SGCE-203ENST00000425444 GCATO75600 419 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 IPO7O95373 1038 aaKnown RBP12.7□□□□□ -0.38
SGCE-203ENST00000425444 TNFP01375 233 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 ITGA2BP08514 1039 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 ZFXP17010 805 aaPredicted RBP12.7□□□□□ -0.38
SGCE-203ENST00000425444 COMTP21964 271 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 LHCGRP22888 699 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 CES1P23141 567 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 ETV3P41162 512 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 KIAA1024LP59773 190 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 SLC10A2Q12908 348 aaPredicted RBP12.7□□□□□ -0.38
SGCE-203ENST00000425444 ELOCQ15369 112 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 TGIF1Q15583 401 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 SLC9A4Q6AI14 798 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 RAET1GQ6H3X3 334 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 ESRP1Q6NXG1 681 aaKnown RBP12.7□□□□□ -0.38
SGCE-203ENST00000425444 TSPAN33Q86UF1 283 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 OR56A4Q8NGH8 313 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 TPCN2Q8NHX9 752 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 FUBP1Q96AE4 644 aaKnown RBP12.7□□□□□ -0.38
SGCE-203ENST00000425444 DTD2Q96FN9 168 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 SCRN2Q96FV2 425 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 MRFAP1L1Q96HT8 127 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 COQ10AQ96MF6 247 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 GEMIN8Q9NWZ8 242 aaKnown RBP12.7□□□□□ -0.38
SGCE-203ENST00000425444 KCTD5Q9NXV2 234 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 SEPT10Q9P0V9 454 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 LRRK1Q38SD2 2015 aa12.7□□□□□ -0.38
SGCE-203ENST00000425444 C3orf70A6NLC5 250 aaPredicted RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 PDE2AO00408 941 aaPredicted RBP12.69□□□□□ -0.38
SGCE-203ENST00000425444 PSTPIP1O43586 416 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms