RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CCDC153Q494R4 210 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 FUT11Q495W5 492 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 TMEM240Q5SV17 173 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 LYPLAL1Q5VWZ2 237 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 KLHL35Q6PF15 583 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 ADAMTSL2Q86TH1 951 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 MRPL43Q8N983 215 aaKnown RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 KCTD4Q8WVF5 259 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 COL26A1Q96A83 441 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 LINGO1Q96FE5 620 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 DNAJC1Q96KC8 554 aaKnown RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 TEX12Q9BXU0 123 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 RPP40O75818 363 aaKnown RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 LMNAP02545 664 aaKnown RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 ABCB1P08183 1280 aaPredicted RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 NUDT17P0C025 328 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 PKMP14618 531 aaKnown RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 PSMC3P17980 439 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 TSPAN8P19075 237 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 AKT2P31751 481 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 PIK3CGP48736 1102 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 SLC10A2Q12908 348 aaPredicted RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 PRKG2Q13237 762 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 OLIG2Q13516 323 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 TTMPQ5BVD1 217 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 PIK3R6Q5UE93 754 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 CMC1Q7Z7K0 106 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 CFAP206Q8IYR0 622 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 LRRC34Q8IZ02 419 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 GPR135Q8IZ08 494 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 FAM9CQ8IZT9 166 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 OVCA2Q8WZ82 227 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 GTPBP2Q9BX10 602 aaKnown RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 POMKQ9H5K3 350 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 CIDEBQ9UHD4 219 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 PSMD13Q9UNM6 376 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 TNPO3Q9Y5L0 923 aaKnown RBP9.73□□□□□ -0.85
CMSS1-201ENST00000421999 SNX8Q9Y5X2 465 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 HCFC2Q9Y5Z7 792 aa9.73□□□□□ -0.85
CMSS1-201ENST00000421999 FFAR3O14843 346 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 GPR42O15529 346 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 USP1O94782 785 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 CXCL10P02778 98 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 RING1Q06587 406 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ATP6AP1LQ52LC2 224 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 EOGTQ5NDL2 527 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 HLA-DQA1Q5Y7H0 255 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 DEFB119Q8N690 84 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 STYXQ8WUJ0 223 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 P2RY13Q9BPV8 354 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 THTPAQ9BU02 230 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 MRPL46Q9H2W6 279 aaKnown RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 FKBPLQ9UIM3 349 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 TPRP12270 2363 aaKnown RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 A0A088AWK7 358 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ITGA2BP08514 1039 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 DLDP09622 509 aaKnown RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 MLNP12872 115 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ATF6P18850 670 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ZNF10P21506 573 aaPredicted RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 IL10P22301 178 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 KRT20P35900 424 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 CHI3L1P36222 383 aaPredicted RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 STX5Q13190 355 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 NAB1Q13506 487 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 SF1Q15637 639 aaKnown RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 SNCBQ16143 134 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 CPSF6Q16630 551 aaKnown RBP eCLIP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 SPDYCQ5MJ68 293 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 DNAJC14Q6Y2X3 702 aaPredicted RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 CERS6Q6ZMG9 384 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 APOPT1Q96IL0 206 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 DPY30Q9C005 99 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ZNF576Q9H609 170 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 HEY2Q9UBP5 337 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 TRIP12Q14669 1992 aaPredicted RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 TM9SF1O15321 606 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 FAM155BO75949 473 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 SERPINE1P05121 402 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ACTR1BP42025 376 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ACTR1AP61163 376 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 SKOR1P84550 965 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 GALNT2Q10471 571 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ZBTB17Q13105 803 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 UAP1L1Q3KQV9 507 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ESRP1Q6NXG1 681 aaKnown RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 IL27RAQ6UWB1 636 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 GDPD4Q6W3E5 623 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 WDR48Q8TAF3 677 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 PIP4K2CQ8TBX8 421 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 HEXDCQ8WVB3 486 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 OTUB2Q96DC9 234 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 BBS4Q96RK4 519 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 RBBP8Q99708 897 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ECT2Q9H8V3 914 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 WDR6Q9NNW5 1121 aaKnown RBP9.72□□□□□ -0.85
CMSS1-201ENST00000421999 SPHK2Q9NRA0 654 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ZDHHC18Q9NUE0 388 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 IGSF9Q9P2J2 1179 aa9.72□□□□□ -0.85
CMSS1-201ENST00000421999 ANGPTL2Q9UKU9 493 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms