RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 TREX1Q9NSU2 369 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 IL1RAPL1Q9NZN1 696 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 ZC3H7BQ9UGR2 993 aaKnown RBP15.66■□□□□ 0.1
DDX55-203ENST00000421670 RPS6KL1Q9Y6S9 549 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 FAM237BA0A1B0GVD1 139 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 MEI4A8MW99 385 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 K7ESM1 405 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 GAPDHSO14556 408 aaPredicted RBP15.66■□□□□ 0.1
DDX55-203ENST00000421670 EIF3HO15372 352 aaKnown RBP eCLIP15.66■□□□□ 0.1
DDX55-203ENST00000421670 PCCBP05166 539 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 PGAM1P18669 254 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 SPAM1P38567 509 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 PTGER3P43115 390 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 CREB5Q02930 508 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 LAMB3Q13751 1172 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 CRYMQ14894 314 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 IRF4Q15306 451 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 WSCD2Q2TBF2 565 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 WDR93Q6P2C0 686 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 CAPN12Q6ZSI9 719 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 NLRP9Q7RTR0 991 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 CYP2U1Q7Z449 544 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 TP53I13Q8NBR0 393 aaPredicted RBP15.66■□□□□ 0.1
DDX55-203ENST00000421670 AP2M1Q96CW1 435 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 C9orf72Q96LT7 481 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 TBATAQ96M53 351 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 RIOK2Q9BVS4 552 aaKnown RBP15.66■□□□□ 0.1
DDX55-203ENST00000421670 PARD6BQ9BYG5 372 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 ABCG8Q9H221 673 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 PLAC1Q9HBJ0 212 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 MBNL1Q9NR56 388 aaKnown RBP15.66■□□□□ 0.1
DDX55-203ENST00000421670 CA5BQ9Y2D0 317 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 PCDHGA2Q9Y5H1 932 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 SLCO1B1Q9Y6L6 691 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 R4GN57 208 aa15.66■□□□□ 0.1
DDX55-203ENST00000421670 OR51F1A6NGY5 319 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 METTL12A8MUP2 240 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 USP1O94782 785 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 POLBP06746 335 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 HADHAP40939 763 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 MAGEA4P43358 317 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 ACVR1Q04771 509 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 CBLBQ13191 982 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 LRRC14Q15048 493 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 AGERQ15109 404 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 SKIDA1Q1XH10 827 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 ANKRD20A4Q4UJ75 823 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 HENMT1Q5T8I9 393 aaKnown RBP15.65■□□□□ 0.1
DDX55-203ENST00000421670 PMS2CLQ68D20 193 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 CCNI2Q6ZMN8 369 aaPredicted RBP15.65■□□□□ 0.1
DDX55-203ENST00000421670 UNC5AQ6ZN44 842 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 CEP68Q76N32 757 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 LPCAT2Q7L5N7 544 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 TMEM135Q86UB9 458 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 NRSN1Q8IZ57 195 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 PLA2G15Q8NCC3 412 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 PYROXD1Q8WU10 500 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 HDAC10Q969S8 669 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 PLEKHG4BQ96PX9 1271 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 AGAP2Q99490 1192 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 KLF6Q99612 283 aaPredicted RBP15.65■□□□□ 0.1
DDX55-203ENST00000421670 PCED1AQ9H1Q7 454 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 DUSP15Q9H1R2 295 aaPredicted RBP15.65■□□□□ 0.1
DDX55-203ENST00000421670 FAM83DQ9H4H8 585 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 IL26Q9NPH9 171 aa15.65■□□□□ 0.1
DDX55-203ENST00000421670 EIF2B4Q9UI10 523 aaKnown RBP15.65■□□□□ 0.1
DDX55-203ENST00000421670 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.65■□□□□ 0.1
DDX55-203ENST00000421670 ATXN2Q99700 1313 aaKnown RBP15.64■□□□□ 0.09
DDX55-203ENST00000421670 GLYATL1P3A0A0U1RQE8 302 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 ZCWPW2A0A1B0GU75 182 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 MAGEB16A2A368 324 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 H0Y8X5 98 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 PRAMEF1O95521 474 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 HNRNPA2B1P22626 353 aaKnown RBP15.64■□□□□ 0.09
DDX55-203ENST00000421670 MAOBP27338 520 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 ARNTP27540 789 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 MC4RP32245 332 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 CNR2P34972 360 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 IGFALSP35858 605 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 DCDC1P59894 354 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 PRAMEP78395 509 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 PEX6Q13608 980 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 PLK5Q496M5 336 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 UBAP2Q5T6F2 1119 aaKnown RBP15.64■□□□□ 0.09
DDX55-203ENST00000421670 RAET1GQ6H3X3 334 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 UNC5BQ8IZJ1 945 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 EIF1ADQ8N9N8 165 aaKnown RBP15.64■□□□□ 0.09
DDX55-203ENST00000421670 PRSS33Q8NF86 280 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 MYRIPQ8NFW9 859 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 FOXJ1Q92949 421 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 PEX13Q92968 403 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 CENPTQ96BT3 561 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 CDKN2AIPNLQ96HQ2 116 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 ORAI3Q9BRQ5 295 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 NAT9Q9BTE0 207 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 SPATA16Q9BXB7 569 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 C1QTNF7Q9BXJ2 289 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 NFKBIL1Q9UBC1 381 aaPredicted RBP15.64■□□□□ 0.09
DDX55-203ENST00000421670 RIMKLBQ9ULI2 386 aa15.64■□□□□ 0.09
DDX55-203ENST00000421670 LRP4O75096 1905 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms