RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SLC22A9Q8IVM8 553 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CLYBLQ8N0X4 340 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 NAT16Q8N8M0 369 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 TRPV1Q8NER1 839 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 FBXO32Q969P5 355 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CCDC126Q96EE4 140 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 SYT17Q9BSW7 474 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CCDC68Q9H2F9 335 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 VPS28Q9UK41 221 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 NDUFAF1Q9Y375 327 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 DHRS12A0PJE2 317 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 BTN3A1O00481 513 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 TNFRSF10BO14763 440 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 MAGEB3O15480 346 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 HSPA8P11142 646 aaKnown RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 RPL9P32969 192 aaKnown RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 KCNQ1P51787 676 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 HK2P52789 917 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 HUNKP57058 714 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 HERVK_113P63132 956 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 MORN1Q5T089 497 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 RALGPS2Q86X27 583 aaPredicted RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 PCYOX1LQ8NBM8 494 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 OR2T34Q8NGX1 318 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 OR2T3Q8NH03 318 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 ZFRQ96KR1 1074 aaKnown RBP11.87□□□□□ -0.51
LIMK1-202ENST00000418310 ERVK-6Q9BXR3 956 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 CCSER2Q9H7U1 834 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 IRAK4Q9NWZ3 460 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 PTTG2Q9NZH5 202 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 POLG2Q9UHN1 485 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 OAZ3Q9UMX2 235 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 MYRFQ9Y2G1 1151 aa11.87□□□□□ -0.51
LIMK1-202ENST00000418310 NYNRINQ9P2P1 1898 aaKnown RBP11.86□□□□□ -0.51
LIMK1-202ENST00000418310 GPX3P22352 226 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 CYP2C18P33260 490 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 PIK3CGP48736 1102 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 NR1H2P55055 460 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 PPP1R8Q12972 351 aaKnown RBP11.86□□□□□ -0.51
LIMK1-202ENST00000418310 TTC33Q6PID6 262 aaPredicted RBP11.86□□□□□ -0.51
LIMK1-202ENST00000418310 SLC15A3Q8IY34 581 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 MIER2Q8N344 545 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 FBXO39Q8N4B4 442 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 C2orf69Q8N8R5 385 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 OR4K2Q8NGD2 314 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 VPS50Q96JG6 964 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 FAR2Q96K12 515 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 RANBP9Q96S59 729 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 ZNF696Q9H7X3 374 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 VPS45Q9NRW7 570 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 POLR3BQ9NW08 1133 aaPredicted RBP11.86□□□□□ -0.51
LIMK1-202ENST00000418310 MARCH2Q9P0N8 246 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 DMTF1Q9Y222 760 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 SLC22A2O15244 555 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 OR1I1O60431 355 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 PFDN1O60925 122 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 KATNA1O75449 491 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 SLC7A1P30825 629 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 STT3AP46977 705 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 TAF10Q12962 218 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 C18orf21Q32NC0 220 aaPredicted RBP11.86□□□□□ -0.51
LIMK1-202ENST00000418310 KIAA0408Q6ZU52 694 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 CDYL2Q8N8U2 506 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 MAGEE2Q8TD90 523 aaPredicted RBP11.86□□□□□ -0.51
LIMK1-202ENST00000418310 GPR21Q99679 349 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 SLC30A3Q99726 388 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 ARHGAP39Q9C0H5 1083 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 NACA2Q9H009 215 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 SMOXQ9NWM0 555 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 CMTM6Q9NX76 183 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 TMEM181Q9P2C4 612 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 ASB1Q9Y576 335 aa11.86□□□□□ -0.51
LIMK1-202ENST00000418310 NIPSNAP2O75323 286 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 TRMUO75648 421 aaKnown RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 H6PDO95479 791 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 C8BP07358 591 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 ATXN1LP0C7T5 689 aaKnown RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 ZNF37AP17032 561 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 CDH2P19022 906 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 RGRP47804 291 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 HSPA13P48723 471 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 DNAJC14Q6Y2X3 702 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 FIBCD1Q8N539 461 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 ARRDC2Q8TBH0 407 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 CATSPERZQ9NTU4 200 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 CD300AQ9UGN4 299 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 PCDHGC4Q9Y5F7 938 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 EI24O14681 340 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 AP1G1O43747 822 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 AKR1A1P14550 325 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 GGT5P36269 586 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 ZNF135P52742 658 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 UFM1P61960 85 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 FAM45BPQ6NSW5 357 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 LGI2Q8N0V4 545 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 GABPB2Q8TAK5 448 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 FAM45AQ8TCE6 357 aa11.85□□□□□ -0.51
LIMK1-202ENST00000418310 MTG1Q9BT17 334 aaPredicted RBP11.85□□□□□ -0.51
LIMK1-202ENST00000418310 RBM38Q9H0Z9 239 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms