RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 LRRC6Q86X45 466 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 CACUL1Q86Y37 369 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 TDRPQ86YL5 185 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 CNPY4Q8N129 248 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 GPR26Q8NDV2 337 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 OR6P1Q8NGX9 317 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 CXorf40AQ8TE69 158 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 SLC44A1Q8WWI5 657 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 ASB12Q8WXK4 309 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 ZIM3Q96PE6 472 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 WRAP53Q9BUR4 548 aaKnown RBP14.21□□□□□ -0.13
SF3B1-204ENST00000414963 FAM83DQ9H4H8 585 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 SGK2Q9HBY8 427 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 PPANQ9NQ55 473 aaKnown RBP14.21□□□□□ -0.13
SF3B1-204ENST00000414963 NSMCE4AQ9NXX6 385 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 SLC24A2Q9UI40 661 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 FKBPLQ9UIM3 349 aa14.21□□□□□ -0.13
SF3B1-204ENST00000414963 GLYATL1P3A0A0U1RQE8 302 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 EXOC1LA0A1B0GW35 172 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 AGAP14A8MT82 685 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 CCL22O00626 93 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 CD3EAPO15446 510 aaKnown RBP14.2□□□□□ -0.14
SF3B1-204ENST00000414963 PI15O43692 258 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 MMP20O60882 483 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 ZNF217O75362 1048 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 SASH3O75995 380 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 SRP72O76094 671 aaKnown RBP14.2□□□□□ -0.14
SF3B1-204ENST00000414963 SLC4A1P02730 911 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 IVLP07476 585 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 C6P13671 934 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 GCAP28676 217 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 MC4RP32245 332 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 FOXN2P32314 431 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 RPS21P63220 83 aaKnown RBP14.2□□□□□ -0.14
SF3B1-204ENST00000414963 CACNG1Q06432 222 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 DPTQ07507 201 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 ZNF844Q08AG5 666 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 IFFO1Q0D2I5 559 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 ILF2Q12905 390 aaKnown RBP14.2□□□□□ -0.14
SF3B1-204ENST00000414963 ACOX1Q15067 660 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 GPR33Q49SQ1 333 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 TMEM259Q4ZIN3 620 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 ANO7Q6IWH7 933 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 KIAA1161Q6NSJ0 714 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 MRNIPQ6NTE8 343 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 RFLNAQ6ZTI6 216 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 OR2W6PQ8NHA6 318 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 OR14C36Q8NHC7 312 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 DTD2Q96FN9 168 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 HHIPQ96QV1 700 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 TCF12Q99081 682 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 C1QTNF2Q9BXJ5 285 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 IL1RAPL1Q9NZN1 696 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 ZFATQ9P243 1243 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 BCCIPQ9P287 314 aaKnown RBP eCLIP14.2□□□□□ -0.14
SF3B1-204ENST00000414963 ZNF180Q9UJW8 692 aa14.2□□□□□ -0.14
SF3B1-204ENST00000414963 MYLKQ15746 1914 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 TRBV5-4A0A0C4DH59 114 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 IGLON5A6NGN9 336 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 K7ESF4 209 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 RECQL5O94762 991 aaPredicted RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 PCDH8O95206 1070 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 OGNP20774 298 aaKnown RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 ETV3P41162 512 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 MSH2P43246 934 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 TYSND1Q2T9J0 566 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 HENMT1Q5T8I9 393 aaKnown RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 CERS6Q6ZMG9 384 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 SNX20Q7Z614 316 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 PTAR1Q7Z6K3 402 aaPredicted RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 SDCCAG8Q86SQ7 713 aaPredicted RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 HORMAD1Q86X24 394 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 CILP2Q8IUL8 1156 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 PGBD3Q8N328 593 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 RIBC1Q8N443 379 aaPredicted RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 TRAM1L1Q8N609 369 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 PPM1NQ8N819 430 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 C2CD4AQ8NCU7 369 aaPredicted RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 OR2T34Q8NGX1 318 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 ZNF398Q8TD17 642 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 AGAP2Q99490 1192 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 CPNE1Q99829 537 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 MCMBPQ9BTE3 642 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 BTBD1Q9H0C5 482 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 ABCG8Q9H221 673 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 IARS2Q9NSE4 1012 aaKnown RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 CATSPERZQ9NTU4 200 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 SMOXQ9NWM0 555 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 EURLQ9NYK6 297 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 MARCH4Q9P2E8 410 aaPredicted RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 FBXO5Q9UKT4 447 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 ZFR2Q9UPR6 939 aaKnown RBP14.19□□□□□ -0.14
SF3B1-204ENST00000414963 SLC30A1Q9Y6M5 507 aa14.19□□□□□ -0.14
SF3B1-204ENST00000414963 TECTAO75443 2155 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 CCDC163A0A0D9SF12 145 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 OR51F1A6NGY5 319 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 LRRC72A6NJI9 287 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 GOLGA8KD6RF30 607 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 GOLGA8TH3BQL2 631 aa14.18□□□□□ -0.14
SF3B1-204ENST00000414963 AGPSO00116 658 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms