RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 RSPH9Q9H1X1 276 aaPredicted RBP9.97□□□□□ -0.81
DDB1-202ENST00000414411 POLR3BQ9NW08 1133 aaPredicted RBP9.97□□□□□ -0.81
DDB1-202ENST00000414411 C2orf42Q9NWW7 574 aa9.97□□□□□ -0.81
DDB1-202ENST00000414411 DCTN4Q9UJW0 460 aa9.97□□□□□ -0.81
DDB1-202ENST00000414411 SARDHQ9UL12 918 aa9.97□□□□□ -0.81
DDB1-202ENST00000414411 PLLPQ9Y342 182 aa9.97□□□□□ -0.81
DDB1-202ENST00000414411 PI15O43692 258 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 FZD6O60353 706 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 SYNCRIPO60506 623 aaKnown RBP9.96□□□□□ -0.81
DDB1-202ENST00000414411 ATG13O75143 517 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 PMPCBO75439 489 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 LEFTY1O75610 366 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 AP2A1O95782 977 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 CNTFP26441 200 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 SLC8A1P32418 973 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 GEMP55040 296 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 WNT3AP56704 352 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 RAD51Q06609 339 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 TRAF2Q12933 501 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 PRPSAP1Q14558 356 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 ARSIQ5FYB1 569 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 RYBPQ8N488 228 aaPredicted RBP9.96□□□□□ -0.81
DDB1-202ENST00000414411 SPEM1Q8N4L4 309 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 OR2T3Q8NH03 318 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 HCAR2Q8TDS4 363 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 OR8D1Q8WZ84 308 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 INPP5DQ92835 1189 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 TDRD1Q9BXT4 1180 aaKnown RBP9.96□□□□□ -0.81
DDB1-202ENST00000414411 MKRN2Q9H000 416 aaKnown RBP9.96□□□□□ -0.81
DDB1-202ENST00000414411 SUV39H2Q9H5I1 410 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 ZDHHC6Q9H6R6 413 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 ATP13A3Q9H7F0 1226 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 FBRSQ9HAH7 460 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 IL36AQ9UHA7 158 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 ZFP69BQ9UJL9 534 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 RAI2Q9Y5P3 530 aa9.96□□□□□ -0.81
DDB1-202ENST00000414411 TMEM221A6NGB7 291 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 SDR42E2A6NKP2 422 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 M0R296 226 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 PSMD3O43242 534 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 SOCS5O75159 536 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 PIGNO95427 931 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 PRNPP04156 253 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 UGT2B4P06133 528 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 PDHA1P08559 390 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 T-ENOLP0DO92 83 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 NEFHP12036 1026 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 AOC1P19801 751 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 SATB1Q01826 763 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 CDK18Q07002 472 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 BCL2L1Q07817 233 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 STARD3Q14849 445 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 TAF1BQ53T94 588 aaPredicted RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 DENND5AQ6IQ26 1287 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 CASC4Q6P4E1 433 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 GDPD4Q6W3E5 623 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 TIFABQ6ZNK6 161 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 MARK2Q7KZI7 788 aaKnown RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 CLNKQ7Z7G1 428 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 MTDHQ86UE4 582 aaKnown RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 ZSWIM9Q86XI8 627 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 CCNJLQ8IV13 435 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 FLCNQ8NFG4 579 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 UTP4Q969X6 686 aaKnown RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 FEM1CQ96JP0 617 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 TMEM237Q96Q45 408 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 RAB3IPQ96QF0 476 aaPredicted RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 OSBPL1AQ9BXW6 950 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 MFSD1Q9H3U5 465 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 ARNT2Q9HBZ2 717 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 PCMTD2Q9NV79 361 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 SIRPGQ9P1W8 387 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 DKK3Q9UBP4 350 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 HAO1Q9UJM8 370 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 STK38LQ9Y2H1 464 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 A0A0G2JND7 137 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 TSPAN11A1L157 253 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 PGLSO95336 258 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 DCNP07585 359 aaKnown RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 PGAM1P18669 254 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 MGAT1P26572 445 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 SERPINA4P29622 427 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 CRHR1P34998 444 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 CLCN5P51795 746 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 GTF2A1P52655 376 aaPredicted RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 METAP1P53582 386 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 SESN2P58004 480 aaPredicted RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 RPS14P62263 151 aaKnown RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 CRADDP78560 199 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 MTAPQ13126 283 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 MSLNQ13421 630 aaPredicted RBP9.95□□□□□ -0.82
DDB1-202ENST00000414411 OLIG2Q13516 323 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 CRYMQ14894 314 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 ZNF805Q5CZA5 627 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 WLSQ5T9L3 541 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 MROH9Q5TGP6 573 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 ZNF449Q6P9G9 518 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 DSG4Q86SJ6 1040 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 TMPRSS6Q8IU80 811 aa9.95□□□□□ -0.82
DDB1-202ENST00000414411 MMAAQ8IVH4 418 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms