RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 SEPT6Q14141 434 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 FRG1Q14331 258 aaKnown RBP15.17■□□□□ 0.02
LSM5-207ENST00000410044 PTPRCAPQ14761 206 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 WSCD2Q2TBF2 565 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 PLK5Q496M5 336 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 ANKRD20A4Q4UJ75 823 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 HENMT1Q5T8I9 393 aaKnown RBP15.17■□□□□ 0.02
LSM5-207ENST00000410044 STEAP4Q687X5 459 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 PMS2CLQ68D20 193 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 ESRP1Q6NXG1 681 aaKnown RBP15.17■□□□□ 0.02
LSM5-207ENST00000410044 CYS1Q717R9 158 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 SLC41A1Q8IVJ1 513 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 NUS1Q96E22 293 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 DNAJC1Q96KC8 554 aaKnown RBP15.17■□□□□ 0.02
LSM5-207ENST00000410044 PARD6BQ9BYG5 372 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 KCNH6Q9H252 994 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 BPIFA1Q9NP55 256 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 IL26Q9NPH9 171 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.17■□□□□ 0.02
LSM5-207ENST00000410044 APPL1Q9UKG1 709 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 V9GYY5 206 aaPredicted RBP15.17■□□□□ 0.02
LSM5-207ENST00000410044 SPAG17Q6Q759 2223 aa15.17■□□□□ 0.02
LSM5-207ENST00000410044 TNRC6BQ9UPQ9 1833 aaKnown RBP15.16■□□□□ 0.02
LSM5-207ENST00000410044 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 ZCWPW2A0A1B0GU75 182 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 PRR23AA6NEV1 266 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 PRAMEF26H0Y7S4 382 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 GAPDHSO14556 408 aaPredicted RBP15.16■□□□□ 0.02
LSM5-207ENST00000410044 RHOBTB1O94844 696 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 FSBPO95073 299 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 PYGLP06737 847 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 POLBP06746 335 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 GSTA2P09210 222 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 HNRNPA2B1P22626 353 aaKnown RBP15.16■□□□□ 0.02
LSM5-207ENST00000410044 TRIM23P36406 574 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 SPAM1P38567 509 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 MAGEA4P43358 317 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 SRSF5Q13243 272 aaKnown RBP15.16■□□□□ 0.02
LSM5-207ENST00000410044 LRRC14Q15048 493 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 SPANXN3Q5MJ09 141 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 PDPK2PQ6A1A2 396 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 KIAA0930Q6ICG6 404 aaPredicted RBP15.16■□□□□ 0.02
LSM5-207ENST00000410044 CASC4Q6P4E1 433 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 TMEFF1Q8IYR6 380 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 ZBED8Q8IZ13 594 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 TRAM1L1Q8N609 369 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 FBXO36Q8NEA4 188 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 C1orf216Q8TAB5 229 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 FAM174AQ8TBP5 190 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 PYROXD1Q8WU10 500 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 KLK6Q92876 244 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 MFSD3Q96ES6 412 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 TBATAQ96M53 351 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 FCRL3Q96P31 734 aaPredicted RBP15.16■□□□□ 0.02
LSM5-207ENST00000410044 PLAC1Q9HBJ0 212 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 SAYSD1Q9NPB0 183 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 SLC2A6Q9UGQ3 507 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 MAD1L1Q9Y6D9 718 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 RPS6KL1Q9Y6S9 549 aa15.16■□□□□ 0.02
LSM5-207ENST00000410044 TOR1BO14657 336 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 RAD51BO15315 384 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 SLC31A1O15431 190 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 HOXC4P09017 264 aaPredicted RBP15.15■□□□□ 0.02
LSM5-207ENST00000410044 MYBL2P10244 700 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 TSHRP16473 764 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 MAT2AP31153 395 aaKnown RBP15.15■□□□□ 0.02
LSM5-207ENST00000410044 ARCN1P48444 511 aaKnown RBP15.15■□□□□ 0.02
LSM5-207ENST00000410044 ARSDP51689 593 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 VSNL1P62760 191 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 PEX6Q13608 980 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 NAA30Q147X3 362 aaPredicted RBP15.15■□□□□ 0.02
LSM5-207ENST00000410044 SLMAPQ14BN4 828 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 FASTKD3Q14CZ7 662 aaKnown RBP15.15■□□□□ 0.02
LSM5-207ENST00000410044 PNCKQ6P2M8 343 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 TMEM145Q8NBT3 493 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 SCAMP4Q969E2 229 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 HDAC10Q969S8 669 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 AP2M1Q96CW1 435 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 ZSCAN5AQ9BUG6 496 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 RIOK2Q9BVS4 552 aaKnown RBP15.15■□□□□ 0.02
LSM5-207ENST00000410044 TXLNGYQ9BZA5 131 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 IRF2BPLQ9H1B7 796 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 MBNL1Q9NR56 388 aaKnown RBP15.15■□□□□ 0.02
LSM5-207ENST00000410044 ZC3H7BQ9UGR2 993 aaKnown RBP15.15■□□□□ 0.02
LSM5-207ENST00000410044 FKBPLQ9UIM3 349 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 CHMP2BQ9UQN3 213 aa15.15■□□□□ 0.02
LSM5-207ENST00000410044 GLYATL1P3A0A0U1RQE8 302 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 SRP72O76094 671 aaKnown RBP15.14■□□□□ 0.01
LSM5-207ENST00000410044 SOD1P00441 154 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 FAM153BP0C7A2 387 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 PAMP19021 973 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 ARNTP27540 789 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 AKT2P31751 481 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 TCF15Q12870 199 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 SIM2Q14190 667 aaPredicted RBP15.14■□□□□ 0.01
LSM5-207ENST00000410044 ELF2Q15723 593 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 FAM153CQ494X1 144 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 GPR33Q49SQ1 333 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 WDR45BQ5MNZ6 344 aa15.14■□□□□ 0.01
LSM5-207ENST00000410044 HP1BP3Q5SSJ5 553 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms