RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 LDB2O43679 373 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 CLDN7O95471 211 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 TTC4O95801 387 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 LHCGRP22888 699 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 HADHAP40939 763 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 LIG3P49916 1009 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 VSNL1P62760 191 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 RPS21P63220 83 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 RALGDSQ12967 914 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 MTM1Q13496 603 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 SLMAPQ14BN4 828 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 CNGA3Q16281 694 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 CDKN3Q16667 212 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 SKIDA1Q1XH10 827 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 MSS51Q4VC12 460 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 CCDC38Q502W7 563 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 ZDHHC20Q5W0Z9 365 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 TSPAN33Q86UF1 283 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 TTC30BQ8N4P2 665 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 STYXQ8WUJ0 223 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 BIRC7Q96CA5 298 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 PWWP2AQ96N64 755 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 SMIM14Q96QK8 99 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 EBNA1BP2Q99848 306 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 WRAP53Q9BUR4 548 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 KIFC1Q9BW19 673 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 CDH19Q9H159 772 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 SAYSD1Q9NPB0 183 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 DLL3Q9NYJ7 618 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 EIF2B4Q9UI10 523 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 GGT7Q9UJ14 662 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 CDV3Q9UKY7 258 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 RAB21Q9UL25 225 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 ARL5AQ9Y689 179 aa16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 ZNF106Q9H2Y7 1883 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-208ENST00000409531 DOCK9Q9BZ29 2069 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 FAM237BA0A1B0GVD1 139 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 LNP1A1A4G5 178 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 RGSL1A5PLK6 1076 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 SLC4A1P02730 911 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 CFIP05156 583 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 POLBP06746 335 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 PGAM1P18669 254 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 PI4KAP42356 2102 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 STC1P52823 247 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 LIMK1P53667 647 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 CRADDP78560 199 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 SEMG2Q02383 582 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 PTSQ03393 145 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 PUM1Q14671 1186 aaKnown RBP eCLIP16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 PTPRRQ15256 657 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 TSTD2Q5T7W7 516 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 KIAA0895LQ68EN5 471 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 TRIM69Q86WT6 500 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 HORMAD1Q86X24 394 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 ZBED8Q8IZ13 594 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 PYROXD1Q8WU10 500 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 MIR1-1HGQ9H1L0 117 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 CAPN10Q9HC96 672 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 CHRAC1Q9NRG0 131 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 IL17CQ9P0M4 197 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 TEX264Q9Y6I9 313 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 PLXNA2O75051 1894 aa16.48■□□□□ 0.23
TSPAN4-208ENST00000409531 A0A1B0GTW7 788 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 AURKAO14965 403 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 BCAT2O15382 392 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 LZTS3O60299 673 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 MMP20O60882 483 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 RNGTTO60942 597 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 TM7SF2O76062 418 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 USP1O94782 785 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 FSBPO95073 299 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 C6P13671 934 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 PAMP19021 973 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 ELK3P41970 407 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 ZNF140P52738 457 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 SGCGQ13326 291 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 ACOX1Q15067 660 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 MAP9Q49MG5 647 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 STPG1Q5TH74 334 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 RELL1Q8IUW5 271 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 NRSN1Q8IZ57 195 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 CBARPQ8N350 705 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 MPP5Q8N3R9 675 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 FBXO36Q8NEA4 188 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 OR4K2Q8NGD2 314 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 C1orf216Q8TAB5 229 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 C1QTNF7Q9BXJ2 289 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 ZC3H7BQ9UGR2 993 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 CHMP2BQ9UQN3 213 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 DMXL1Q9Y485 3027 aa16.47■□□□□ 0.23
TSPAN4-208ENST00000409531 A0A1W2PQU0 124 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 C10orf142B7Z368 130 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 SLC30A4O14863 429 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 WNT9AO14904 365 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 BANF1O75531 89 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 IGHV4-34P06331 123 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 C1SP09871 688 aa16.46■□□□□ 0.23
TSPAN4-208ENST00000409531 ENGP17813 658 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms