RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 RIPOR1Q6ZS17 1223 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 NDRG1Q92597 394 aaKnown RBP16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 RAB11FIP5Q9BXF6 653 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 ADAMTS10Q9H324 1103 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 CAPN10Q9HC96 672 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 DNAJC11Q9NVH1 559 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 V9GYQ6 96 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 GALTP07902 379 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 HSD17B2P37059 387 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 SMIM11AP58511 58 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 RHBDF2Q6PJF5 856 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 DET1Q7L5Y6 550 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 TRMT61BQ9BVS5 477 aaKnown RBP16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 SLC12A4Q9UP95 1085 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 NR2E1Q9Y466 385 aa16.76■□□□□ 0.27
PCDHA13-202ENST00000409494 SNRPB2P08579 225 aaKnown RBP16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 HGFP14210 728 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 AKT2P31751 481 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 EID3Q8N140 333 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 UNKQ9C0B0 810 aaKnown RBP16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 TDP1Q9NUW8 608 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 AP4S1Q9Y587 144 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 A0A1W2PPM1 405 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 LDLRP01130 860 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 GSNP06396 782 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 UBE3AQ05086 875 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 ABRQ12979 859 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 OASLQ15646 514 aaKnown RBP16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 NDUFA9Q16795 377 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 ZNF621Q6ZSS3 439 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 GPR141Q7Z602 305 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 RP9Q8TA86 221 aaKnown RBP16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 BPIFB1Q8TDL5 484 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 RPS6KA6Q9UK32 745 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 MTMR11A4FU01 709 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 VIPP01282 170 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 APOA1P02647 267 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 RFX3P48380 749 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 ECT2LQ008S8 904 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 PLIN5Q00G26 463 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 RING1Q06587 406 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 ZBTB49Q6ZSB9 765 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 SLC51AQ86UW1 340 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 SNX32Q86XE0 403 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 OR14C36Q8NHC7 312 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 OSBPL7Q9BZF2 842 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 C8GP07360 202 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 IQCF3P0C7M6 154 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 CCNFP41002 786 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 ALDH6A1Q02252 535 aaKnown RBP16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 TBCELQ5QJ74 424 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 SPATA19Q7Z5L4 167 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 B4GALNT2Q8NHY0 566 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 SCAMP5Q8TAC9 235 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 IRF7Q92985 503 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 NMD3Q96D46 503 aaKnown RBP16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 NDNQ99608 321 aa16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 MTF2Q9Y483 593 aaPredicted RBP16.75■□□□□ 0.27
PCDHA13-202ENST00000409494 PIAS1O75925 651 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 FAM58BPP0C7Q3 252 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 JAK1P23458 1154 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 SETD9Q8NE22 299 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 SLC35B2Q8TB61 432 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 CRYGNQ8WXF5 182 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 A0A1W2PRU2 124 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 PDE9AO76083 593 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 WDR47O94967 919 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 PFKLP17858 780 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 PTGIRP43119 386 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 ASMTP46597 345 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 PKNOX1P55347 436 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 ACAP2Q15057 778 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 MAPKAPK3Q16644 382 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 MSANTD2Q6P1R3 559 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 NET1Q7Z628 596 aaPredicted RBP16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 GPR135Q8IZ08 494 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 PSMG2Q969U7 264 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 RGSL1A5PLK6 1076 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 RGS20O76081 388 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 ATP13A5Q4VNC0 1218 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 ADGRD1Q6QNK2 874 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 CCDC167Q9P0B6 97 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 INVSQ9Y283 1065 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 MYH3P11055 1940 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 FPGTO14772 594 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 PRAMEF1O95521 474 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 LATS1O95835 1130 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 DLG2Q15700 870 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 RFTN2Q52LD8 501 aaPredicted RBP16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 SPPL2AQ8TCT8 520 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 LRMDAQ9H2I8 198 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
PCDHA13-202ENST00000409494 MAN1A2O60476 641 aa16.73■□□□□ 0.27
PCDHA13-202ENST00000409494 STK16O75716 305 aa16.73■□□□□ 0.27
PCDHA13-202ENST00000409494 BPGMP07738 259 aa16.73■□□□□ 0.27
PCDHA13-202ENST00000409494 BNIP1Q12981 228 aa16.73■□□□□ 0.27
PCDHA13-202ENST00000409494 METTL21CQ5VZV1 264 aa16.73■□□□□ 0.27
PCDHA13-202ENST00000409494 GPR180Q86V85 440 aa16.73■□□□□ 0.27
PCDHA13-202ENST00000409494 PLD3Q8IV08 490 aa16.73■□□□□ 0.27
PCDHA13-202ENST00000409494 ATG16L2Q8NAA4 619 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms