RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SUPT7LO94864 414 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 PCSK1P29120 753 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 EML3Q32P44 896 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 UNC50Q53HI1 259 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 LCN8Q6JVE9 175 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 KDELC2Q7Z4H8 507 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 RTN4RL1Q86UN2 441 aaPredicted RBP19.8■□□□□ 0.76
CCDC47-202ENST00000403162 EPHX4Q8IUS5 362 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 LRRC49Q8IUZ0 686 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 CBR4Q8N4T8 237 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 FAM110BQ8TC76 370 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 SEPT8Q92599 483 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 MYLPFQ96A32 169 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 FEM1CQ96JP0 617 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 AKTIPQ9H8T0 292 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 PRDM5Q9NQX1 630 aaPredicted RBP19.8■□□□□ 0.76
CCDC47-202ENST00000403162 RGS18Q9NS28 235 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 ZNHIT2Q9UHR6 403 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 SAC3D1A6NKF1 404 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 ZNF623O75123 536 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 PAGE1O75459 146 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 MT-CO1P00395 513 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 C7P10643 843 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 HERVK_113P63132 956 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 PLOD1Q02809 727 aaPredicted RBP19.8■□□□□ 0.76
CCDC47-202ENST00000403162 NOMO2Q5JPE7 1267 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 TMEM207Q6UWW9 146 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 MRPL10Q7Z7H8 261 aaKnown RBP19.8■□□□□ 0.76
CCDC47-202ENST00000403162 ISCA2Q86U28 154 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.8■□□□□ 0.76
CCDC47-202ENST00000403162 ASB2Q96Q27 587 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 ERVK-6Q9BXR3 956 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 SLC25A51Q9H1U9 297 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 ALG9Q9H6U8 611 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 C8orf4Q9NR00 106 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 NDFIP2Q9NV92 336 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 OSER1Q9NX31 292 aa19.8■□□□□ 0.76
CCDC47-202ENST00000403162 KCNC1P48547 511 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 SERPINH1P50454 418 aaKnown RBP19.79■□□□□ 0.76
CCDC47-202ENST00000403162 PRAMEP78395 509 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 KIF19Q2TAC6 998 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 SPATS1Q496A3 300 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 KLHL35Q6PF15 583 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 TTC33Q6PID6 262 aaPredicted RBP19.79■□□□□ 0.76
CCDC47-202ENST00000403162 DEFB128Q7Z7B8 93 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 OR13J1Q8NGT2 312 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 FNDC8Q8TC99 324 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 MIPOL1Q8TD10 442 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 LINC01599Q8WXQ3 324 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 ISOC1Q96CN7 298 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 PHF12Q96QT6 1004 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 C9orf16Q9BUW7 83 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 ADI1Q9BV57 179 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 CHCHD3Q9NX63 227 aaKnown RBP19.79■□□□□ 0.76
CCDC47-202ENST00000403162 ACTR3BQ9P1U1 418 aa19.79■□□□□ 0.76
CCDC47-202ENST00000403162 NR5A2O00482 541 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 SLC7A4O43246 635 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 PARNO95453 639 aaKnown RBP19.78■□□□□ 0.76
CCDC47-202ENST00000403162 FGF4P08620 206 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 GNAO1P09471 354 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 IL10P22301 178 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 CDKN2DP55273 166 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 MERTKQ12866 999 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 PCSK7Q16549 785 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 GPR158Q5T848 1215 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 AGMOQ6ZNB7 445 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 SLC24A5Q71RS6 500 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 GPR180Q86V85 440 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 SLC15A3Q8IY34 581 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 BBS5Q8N3I7 341 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 LRCH3Q96II8 777 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 OSBPL6Q9BZF3 934 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 PLGRKTQ9HBL7 147 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 RHBDL2Q9NX52 303 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 CROCCQ5TZA2 2017 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 TSPAN8P19075 237 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 FASP25445 335 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 PSMA4P25789 261 aaKnown RBP19.78■□□□□ 0.76
CCDC47-202ENST00000403162 CLCNKBP51801 687 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 ATP6AP1Q15904 470 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 SLC36A3Q495N2 470 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 LRRC43Q8N309 656 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 MIER2Q8N344 545 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 ZNF786Q8N393 782 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 C3orf58Q8NDZ4 430 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 FCRL2Q96LA5 508 aaPredicted RBP19.78■□□□□ 0.76
CCDC47-202ENST00000403162 GAD1Q99259 594 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 MFSD1Q9H3U5 465 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 CDH7Q9ULB5 785 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 AURKCQ9UQB9 309 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 GIT1Q9Y2X7 761 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 DNAJC15Q9Y5T4 150 aa19.78■□□□□ 0.76
CCDC47-202ENST00000403162 MKI67P46013 3256 aaKnown RBP19.78■□□□□ 0.76
CCDC47-202ENST00000403162 FXYD1O00168 92 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 MATN4O95460 622 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 S1PR4O95977 384 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 CAPN3P20807 821 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 CCR1P32246 355 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 FOXM1Q08050 763 aa19.77■□□□□ 0.76
CCDC47-202ENST00000403162 COQ5Q5HYK3 327 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms