RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ZMYND15Q9H091 742 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 PARVAQ9NVD7 372 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 SLC39A1Q9NY26 324 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 KCNK4Q9NYG8 393 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 TMEM98Q9Y2Y6 226 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 PCYT1BQ9Y5K3 369 aaPredicted RBP11.88□□□□□ -0.51
LINC00544-201ENST00000400540 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 EFCAB7A8K855 629 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 DUX1O43812 170 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 PRPSAP2O60256 369 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 RAD1O60671 282 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 RNF8O76064 485 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 PDHA1P08559 390 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 CYP2A6P11509 494 aaPredicted RBP11.87□□□□□ -0.51
LINC00544-201ENST00000400540 FERP16591 822 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 AMPD1P23109 780 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 IL1R2P27930 398 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 CSTF2P33240 577 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC00544-201ENST00000400540 GPR1P46091 355 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 TRA2AQ13595 282 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC00544-201ENST00000400540 CLPPQ16740 277 aaPredicted RBP11.87□□□□□ -0.51
LINC00544-201ENST00000400540 SNAP47Q5SQN1 464 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 TECPR1Q7Z6L1 1165 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 AGBL5Q8NDL9 886 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 SLC37A2Q8TED4 501 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 SCAMP4Q969E2 229 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 ZNF599Q96NL3 588 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 OR2M4Q96R27 311 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 MCCC1Q96RQ3 725 aaPredicted RBP11.87□□□□□ -0.51
LINC00544-201ENST00000400540 AGAP2Q99490 1192 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 CTRCQ99895 268 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 DDA1Q9BW61 102 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 CDH19Q9H159 772 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 HSD3B7Q9H2F3 369 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 ADNPQ9H2P0 1102 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 CHMP5Q9NZZ3 219 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 PHTF1Q9UMS5 762 aa11.87□□□□□ -0.51
LINC00544-201ENST00000400540 A8MU76 341 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 PSMD11O00231 422 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 NKX2-8O15522 239 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 MAFKO60675 156 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 PGLSO95336 258 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 MAP3K6O95382 1288 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 PRKAR1AP10644 381 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 TEAD1P28347 426 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 PPM1FP49593 454 aaPredicted RBP11.86□□□□□ -0.51
LINC00544-201ENST00000400540 MYL5Q02045 173 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 PYCR3Q53H96 274 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 E4F1Q66K89 784 aaPredicted RBP11.86□□□□□ -0.51
LINC00544-201ENST00000400540 LRRC66Q68CR7 880 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 TXNRD3NBQ6F5E7 133 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 TMEM71Q6P5X7 295 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 NRSN1Q8IZ57 195 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 UNC5BQ8IZJ1 945 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 CCDC112Q8NEF3 446 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 PIH1D2Q8WWB5 315 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 RNF31Q96EP0 1072 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 SCRN2Q96FV2 425 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 SCARF2Q96GP6 870 aaPredicted RBP11.86□□□□□ -0.51
LINC00544-201ENST00000400540 ABCG8Q9H221 673 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 APMAPQ9HDC9 416 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 CNOT8Q9UFF9 292 aaKnown RBP11.86□□□□□ -0.51
LINC00544-201ENST00000400540 PILRAQ9UKJ1 303 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 PRKAB1Q9Y478 270 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 TNRC6AQ8NDV7 1962 aaKnown RBP11.86□□□□□ -0.51
LINC00544-201ENST00000400540 TEX15Q9BXT5 2789 aa11.86□□□□□ -0.51
LINC00544-201ENST00000400540 LOC101059948A0A1B0GTJ6 334 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 A0A1W2PQ67 120 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 LRRC53A6NM62 1247 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ZNF891A8MT65 544 aaPredicted RBP11.85□□□□□ -0.51
LINC00544-201ENST00000400540 B4E171 279 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 H3BRJ5 948 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 INPP4BO15327 924 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ZW10O43264 779 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ATP1A3P13637 1013 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
LINC00544-201ENST00000400540 TSPAN7P41732 249 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 MMP13P45452 471 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 CCR10P46092 362 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 FASLGP48023 281 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 HCAR3P49019 387 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 PTSQ03393 145 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 DPTQ07507 201 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 SQSTM1Q13501 440 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 IHHQ14623 411 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 NCAPHQ15003 741 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 IGFBP7Q16270 282 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 DPYSL2Q16555 572 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 DCAF12Q5T6F0 453 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ARMC12Q5T9G4 340 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 TMCO3Q6UWJ1 677 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ADAMTSL4Q6UY14 1074 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 RBM43Q6ZSC3 357 aaKnown RBP11.85□□□□□ -0.51
LINC00544-201ENST00000400540 USP45Q70EL2 814 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 TIPARPQ7Z3E1 657 aaKnown RBP11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ZNF571Q7Z3V5 609 aaPredicted RBP11.85□□□□□ -0.51
LINC00544-201ENST00000400540 POLNQ7Z5Q5 900 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 PSTKQ8IV42 348 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms