RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 MPHOSPH6Q99547 160 aaKnown RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 KCTD14Q9BQ13 255 aaPredicted RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 ING2Q9H160 280 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ADNPQ9H2P0 1102 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ALG2Q9H553 416 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 WDCPQ9H6R7 721 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TREX1Q9NSU2 369 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ZFC3H1O60293 1989 aaKnown RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 KRBA1A5PL33 1030 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 CCL22O00626 93 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 SIX3O95343 332 aaPredicted RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 C7P10643 843 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 JAK1P23458 1154 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 IDUAP35475 653 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 OPRL1P41146 370 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 NFYCQ13952 458 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ACAP2Q15057 778 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 PERM1Q5SV97 790 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 ITIH5Q86UX2 942 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 CLYBLQ8N0X4 340 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 PDZD8Q8NEN9 1154 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 PPP1R13LQ8WUF5 828 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TWIST2Q8WVJ9 160 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.97□□□□□ -0.17
APOB-202ENST00000399256 TMEM125Q96AQ2 219 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TUBGCP3Q96CW5 907 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 TMEM74Q96NL1 305 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 CORO1BQ9BR76 489 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 BEGAINQ9BUH8 593 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 COLEC11Q9BWP8 271 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 GLOD4Q9HC38 313 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 MID1IP1Q9NPA3 183 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 INTS10Q9NVR2 710 aaKnown RBP13.97□□□□□ -0.17
APOB-202ENST00000399256 PCDHA9Q9Y5H5 950 aa13.97□□□□□ -0.17
APOB-202ENST00000399256 PIRO00625 290 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 KPNA6O60684 536 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 SEC14L2O76054 403 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 LINC00032P0C843 101 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 IREB2P48200 963 aaKnown RBP13.96□□□□□ -0.17
APOB-202ENST00000399256 LIPEQ05469 1076 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 KIAA0930Q6ICG6 404 aaPredicted RBP13.96□□□□□ -0.17
APOB-202ENST00000399256 CATSPER4Q7RTX7 472 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 OR52K2Q8NGK3 314 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 WARS2Q9UGM6 360 aaKnown RBP13.96□□□□□ -0.17
APOB-202ENST00000399256 PSME2Q9UL46 239 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 SLC27A5Q9Y2P5 690 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 ST14Q9Y5Y6 855 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 ZSWIM8A7E2V4 1837 aa13.96□□□□□ -0.17
APOB-202ENST00000399256 H0Y858 1186 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 RSL1D1O76021 490 aaKnown RBP13.96□□□□□ -0.18
APOB-202ENST00000399256 ANXA9O76027 345 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 SLC4A1P02730 911 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 HGFP14210 728 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 CDKN2DP55273 166 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 DAOAP59103 153 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 SOX4Q06945 474 aaPredicted RBP13.96□□□□□ -0.18
APOB-202ENST00000399256 GALNT1Q10472 559 aaPredicted RBP13.96□□□□□ -0.18
APOB-202ENST00000399256 CCDC92Q53HC0 331 aaPredicted RBP13.96□□□□□ -0.18
APOB-202ENST00000399256 BROXQ5VW32 411 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 XAF1Q6GPH4 301 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 MOB2Q70IA6 237 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 PIWIL3Q7Z3Z3 882 aaKnown RBP13.96□□□□□ -0.18
APOB-202ENST00000399256 SNX29P2Q8IUI4 249 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 SFRP1Q8N474 314 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 RNF34Q969K3 372 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 RNF145Q96MT1 663 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 NSUN5Q96P11 429 aaKnown RBP13.96□□□□□ -0.18
APOB-202ENST00000399256 SIK2Q9H0K1 926 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 RAD21L1Q9H4I0 556 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 TLR9Q9NR96 1032 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 UBQLN1Q9UMX0 589 aaKnown RBP13.96□□□□□ -0.18
APOB-202ENST00000399256 TSC2P49815 1807 aa13.96□□□□□ -0.18
APOB-202ENST00000399256 IL7RP16871 459 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 EEF1DP29692 281 aaKnown RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 TAF6P49848 677 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 AIF1P55008 147 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 PIGFQ07326 219 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 TTLL4Q14679 1199 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 SPCS2Q15005 226 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 SLC27A1Q6PCB7 646 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 ATPAF2Q8N5M1 289 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 UBXN10Q96LJ8 280 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 FAM49AQ9H0Q0 323 aaPredicted RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 MAGED1Q9Y5V3 778 aaPredicted RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 CSADQ9Y600 493 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 CDK14O94921 469 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 IGFBP6P24592 240 aaPredicted RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 DIO3P55073 304 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 TBC1D21Q8IYX1 336 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 PTGR2Q8N8N7 351 aaPredicted RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 GOLM1Q8NBJ4 401 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 ABHD11Q8NFV4 315 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 PNPT1Q8TCS8 783 aaKnown RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 RAB2BQ8WUD1 216 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 KCTD13Q8WZ19 329 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 PTERQ96BW5 349 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 CNDP2Q96KP4 475 aaKnown RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 ZNF560Q96MR9 790 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 TRMOQ9BU70 441 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms