RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 SOD1P00441 154 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 BPIP17213 487 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 MRPS25P82663 173 aaKnown RBP25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 DPTQ07507 201 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 CDH17Q12864 832 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 ZNF542PQ5EBM4 170 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 FUBP1Q96AE4 644 aaKnown RBP25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 LGR4Q9BXB1 951 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 WDR26Q9H7D7 661 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 EIF2B3Q9NR50 452 aaKnown RBP25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 GPR27Q9NS67 375 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 ASIC3Q9UHC3 531 aa25.28■■□□□ 1.64
TMEM55B-202ENST00000398020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 TTI1O43156 1089 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 FOXD2O60548 495 aaPredicted RBP25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 TSHRP16473 764 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 GPR1P46091 355 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 SEPT6Q14141 434 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 TAF1AQ15573 450 aaPredicted RBP25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 CERCAMQ5T4B2 595 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 ANKRD22Q5VYY1 191 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 IL27RAQ6UWB1 636 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 ZNF765Q7L2R6 523 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 HEATR4Q86WZ0 1026 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 BRSK1Q8TDC3 778 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 IL17CQ9P0M4 197 aa25.27■■□□□ 1.64
TMEM55B-202ENST00000398020 SPTY2D1-AS1A0A0U1RR47 76 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 TRIM23P36406 574 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 ADCY8P40145 1251 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 YPEL5P62699 121 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 IL9RQ01113 521 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 PTK6Q13882 451 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 FZD2Q14332 565 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 KCNJ11Q14654 390 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 HENMT1Q5T8I9 393 aaKnown RBP25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 JAMLQ86YT9 394 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 KIF18AQ8NI77 898 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 CPT1BQ92523 772 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 TRIM51Q9BSJ1 452 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 TMEM9BQ9NQ34 198 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 CASS4Q9NQ75 786 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 RGSL1A5PLK6 1076 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 C2orf81A6NN90 581 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 CER1O95813 267 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 CCDC38Q502W7 563 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 DCP2Q8IU60 420 aaKnown RBP25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 RAVER1Q8IY67 606 aaKnown RBP25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 OR4K2Q8NGD2 314 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 RUNDC3BQ96NL0 473 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 ELF4Q99607 663 aaPredicted RBP25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 SPATA16Q9BXB7 569 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 PKP3Q9Y446 797 aa25.26■■□□□ 1.63
TMEM55B-202ENST00000398020 CCDC78A2IDD5 438 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 C4orf47A7E2U8 309 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 FADS2P1A8MWK0 482 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 INPP4BO15327 924 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 STX7O15400 261 aaKnown RBP25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 CRTAMO95727 393 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 TPSB2P20231 275 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 LPOP22079 712 aaPredicted RBP25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 TMPRSS15P98073 1019 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 TPSAB1Q15661 275 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 UAP1L1Q3KQV9 507 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 OR13C4Q8NGS5 318 aa25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 PNMA8BQ9ULN7 279 aaPredicted RBP25.25■■□□□ 1.63
TMEM55B-202ENST00000398020 CACNB4O00305 520 aaPredicted RBP25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 LDB2O43679 373 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 TMEM63AO94886 807 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 SESN2P58004 480 aaPredicted RBP25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 NFATC4Q14934 902 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 ZNF423Q2M1K9 1284 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 STPG1Q5TH74 334 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 ZNF534Q76KX8 674 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 TRIM74Q86UV6 250 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 TEX101Q9BY14 249 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 IL26Q9NPH9 171 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 DNAJC28Q9NX36 388 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 MRFAP1Q9Y605 127 aa25.24■■□□□ 1.63
TMEM55B-202ENST00000398020 TMEM202A6NGA9 273 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 GOLGA8MH3BSY2 632 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 CCL22O00626 93 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 TOR1BO14657 336 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 MAGEA6P43360 314 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 DCDC1P59894 354 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 CDK3Q00526 305 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 CKAP4Q07065 602 aaKnown RBP25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 DHX34Q14147 1143 aaKnown RBP25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 PTK2BQ14289 1009 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 KCTD16Q68DU8 428 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 ENPP7Q6UWV6 458 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 FAM151BQ6UXP7 276 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 MACC1Q6ZN28 852 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 NLRP8Q86W28 1048 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 PARGQ86W56 976 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 HTR1BP28222 390 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 ZNF140P52738 457 aaPredicted RBP25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 CDK16Q00536 496 aa25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 EIF2B5Q13144 721 aaKnown RBP25.23■■□□□ 1.63
TMEM55B-202ENST00000398020 SHBQ15464 509 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms