RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TMEM135Q86UB9 458 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 TSEN2Q8NCE0 465 aaKnown RBP8.39□□□□□ -1.07
SCFD1-202ENST00000396629 FAM172AQ8WUF8 416 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 NCSTNQ92542 709 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 DTD2Q96FN9 168 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 OR2M4Q96R27 311 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 ZMYND15Q9H091 742 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 CATSPERBQ9H7T0 1116 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 CASS4Q9NQ75 786 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 OAS3Q9Y6K5 1087 aaKnown RBP8.39□□□□□ -1.07
SCFD1-202ENST00000396629 TRBV23OR9-2A0A075B6M9 112 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 CDC14CA4D256 554 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 INPP4BO15327 924 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 HEXIM1O94992 359 aaKnown RBP8.39□□□□□ -1.07
SCFD1-202ENST00000396629 EML2O95834 649 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 MMEP08473 750 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 ANKRD34CP0C6C1 535 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 MMP8P22894 467 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 ELAVL4P26378 380 aaKnown RBP8.39□□□□□ -1.07
SCFD1-202ENST00000396629 VIPR1P32241 457 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 NOP2P46087 812 aaKnown RBP8.39□□□□□ -1.07
SCFD1-202ENST00000396629 NDST2P52849 883 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 EPHA4P54764 986 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 SEMA5AQ13591 1074 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 NADK2Q4G0N4 442 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 PYCR3Q53H96 274 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 NOP9Q86U38 636 aaKnown RBP8.39□□□□□ -1.07
SCFD1-202ENST00000396629 MLXIPLQ9NP71 852 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 SARS2Q9NP81 518 aaKnown RBP8.39□□□□□ -1.07
SCFD1-202ENST00000396629 KCND3Q9UK17 655 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 ABCA12Q86UK0 2595 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 GOLGA6L3A6NEY3 463 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 FGF10O15520 208 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-202ENST00000396629 KATNA1O75449 491 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 CREG1O75629 220 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 KRT38O76015 456 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 LDLRP01130 860 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 ETV3P41162 512 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 HHEXQ03014 270 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 DPTQ07507 201 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 EIF2S3LQ2VIR3 472 aaKnown RBP8.38□□□□□ -1.07
SCFD1-202ENST00000396629 C1QL3Q5VWW1 255 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 HSD11B1LQ7Z5J1 315 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 GALNT6Q8NCL4 622 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 SH3KBP1Q96B97 665 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 TRIM55Q9BYV6 548 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 ULBP3Q9BZM4 244 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 SLC39A8Q9C0K1 460 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 TWSG1Q9GZX9 223 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 EPB41L1Q9H4G0 881 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 FZD10Q9ULW2 581 aa8.38□□□□□ -1.07
SCFD1-202ENST00000396629 PCDHGA9Q9Y5G4 932 aaKnown RBP8.38□□□□□ -1.07
SCFD1-202ENST00000396629 MN1Q10571 1320 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-202ENST00000396629 RP1L1Q8IWN7 2480 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-202ENST00000396629 A0A1W2PQ67 120 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 ARHGAP42A6NI28 874 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 TCP11X1B4DZS4 312 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PSMD11O00231 422 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 BIN1O00499 593 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 HTRA2O43464 458 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 CREB3O43889 395 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PALMO75781 387 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 DNAJB5O75953 348 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 C9P02748 559 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 CYP1A1P04798 512 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 HTR7P34969 479 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PPM1FP49593 454 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PAPOLAP51003 745 aaKnown RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 GSCP56915 257 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 AP1S1P61966 158 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 MRPL49Q13405 166 aaKnown RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 LRP8Q14114 963 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 RFTN1Q14699 578 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 INPP5JQ15735 1006 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PAPD7Q5XG87 772 aaKnown RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 RAET1GQ6H3X3 334 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 IYDQ6PHW0 289 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 ADAMTSL4Q6UY14 1074 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 TECPR1Q7Z6L1 1165 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 CREBRFQ8IUR6 639 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 EPS8L1Q8TE68 723 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 CINPQ9BW66 212 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 NAA15Q9BXJ9 866 aaKnown RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 DONSONQ9NYP3 566 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 RWDD2AQ9UIY3 292 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 TMEM98Q9Y2Y6 226 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 DOPEY1Q5JWR5 2465 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 FBN2P35556 2912 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PIPSLA2A3N6 862 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 GOLGA6L4A6NEF3 574 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 SOD1P00441 154 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 CYP2A6P11509 494 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 GPD1P21695 349 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 LHCGRP22888 699 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 RFC1P35251 1148 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 SCNN1BP51168 640 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PGDP52209 483 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 AIF1P55008 147 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms