RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 GPR26Q8NDV2 337 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 GABPB2Q8TAK5 448 aaPredicted RBP12.68□□□□□ -0.38
TRIM39-204ENST00000396548 CABS1Q96KC9 395 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 MAGEB18Q96M61 343 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 BIRC8Q96P09 236 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 GPR78Q96P69 363 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 P2RY13Q9BPV8 354 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 DCDC2Q9UHG0 476 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 SLC39A10Q9ULF5 831 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 CORO1CQ9ULV4 474 aaPredicted RBP12.68□□□□□ -0.38
TRIM39-204ENST00000396548 PKP3Q9Y446 797 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 UPK3BL1B0FP48 263 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 UPK3BL2E5RIL1 263 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 SPECC1L-ADORA2AF8WAN1 911 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 GSTA1P08263 222 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 TYK2P29597 1187 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 ADARP55265 1226 aaKnown RBP12.68□□□□□ -0.38
TRIM39-204ENST00000396548 CDKN2DP55273 166 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 TAS2R39P59534 338 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 SEMG2Q02383 582 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 ELAVL3Q14576 367 aaKnown RBP12.68□□□□□ -0.38
TRIM39-204ENST00000396548 ARRDC3Q96B67 414 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 PHF7Q9BWX1 381 aaPredicted RBP12.68□□□□□ -0.38
TRIM39-204ENST00000396548 SLC13A1Q9BZW2 595 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 CD248Q9HCU0 757 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 PCDH12Q9NPG4 1184 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 TRIOBPQ9H2D6 2365 aa12.68□□□□□ -0.38
TRIM39-204ENST00000396548 FDXRP22570 491 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 ITGB7P26010 798 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 VIPR1P32241 457 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 CTHP32929 405 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 SEC24CP53992 1094 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 RAB10P61026 200 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 CACNG1Q06432 222 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 SMAD2Q15796 467 aaKnown RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 FASTKD1Q53R41 847 aaKnown RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 C2orf27AQ580R0 203 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 CENPLQ8N0S6 344 aaPredicted RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 GDAP1Q8TB36 358 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 DTX3LQ8TDB6 740 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 FAM111AQ96PZ2 611 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 P2RY12Q9H244 342 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 A0A096LPK6 155 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 NPC1O15118 1278 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 GPR39O43194 453 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 SRP72O76094 671 aaKnown RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 PRNPP04156 253 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 TAC1P20366 129 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 MMP12P39900 470 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 CCT5P48643 541 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 DLG1Q12959 904 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 PDK4Q16654 411 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 TMEM196Q5HYL7 178 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 LRRC73Q5JTD7 316 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 IER5LQ5T953 404 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 HECTD2Q5U5R9 776 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 TMEM207Q6UWW9 146 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 RFLNAQ6ZTI6 216 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 Q7L0L9 218 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 UCMAQ8WVF2 138 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 DNASE1L2Q92874 299 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 VPS11Q9H270 941 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 FAM96AQ9H5X1 160 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 ANKRD6Q9Y2G4 727 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 STON1Q9Y6Q2 735 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 GMNCA6NCL1 334 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 A8MX80 341 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 GLRA3O75311 464 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 SLC4A1P02730 911 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 PROCP04070 461 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 ZNF30P17039 623 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 CAMK2GQ13555 558 aaPredicted RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 ZNF460Q14592 562 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 USP10Q14694 798 aaKnown RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 CCDC85BQ15834 202 aaPredicted RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 KYAT3Q6YP21 454 aaKnown RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 CSGALNACT1Q8TDX6 532 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 OR8D1Q8WZ84 308 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 UBXN10Q96LJ8 280 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 PLEKHG4BQ96PX9 1271 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 NDNQ99608 321 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 ZDHHC4Q9NPG8 344 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 ZNF358Q9NW07 568 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 CACNA2D2Q9NY47 1150 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 TMEM216Q9P0N5 145 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 NFKBIL1Q9UBC1 381 aaPredicted RBP12.67□□□□□ -0.38
TRIM39-204ENST00000396548 LIMD1Q9UGP4 676 aa12.67□□□□□ -0.38
TRIM39-204ENST00000396548 SBK3P0C264 359 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 DRD4P21917 467 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 CD9P21926 228 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 CRABP2P29373 138 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 SPINT3P49223 89 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 NFATC2Q13469 925 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 CES4AQ5XG92 561 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 SERPINA13PQ6UXR4 307 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 SDCCAG8Q86SQ7 713 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-204ENST00000396548 LCA5Q86VQ0 697 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 RALGPS2Q86X27 583 aaPredicted RBP12.66□□□□□ -0.38
TRIM39-204ENST00000396548 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
TRIM39-204ENST00000396548 PIP4K2CQ8TBX8 421 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms