RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 LHCGRP22888 699 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 HPDP32754 393 aaPredicted RBP13.65□□□□□ -0.22
VAPB-202ENST00000395802 P2RY2P41231 377 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 LEPRP48357 1165 aaKnown RBP13.65□□□□□ -0.22
VAPB-202ENST00000395802 SPINT3P49223 89 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 ARSDP51689 593 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 COPAP53621 1224 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 DCDC1P59894 354 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 RPS14P62263 151 aaKnown RBP13.65□□□□□ -0.22
VAPB-202ENST00000395802 UBXN2BQ14CS0 331 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 TERF2Q15554 542 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 CRY1Q16526 586 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 USP30Q70CQ3 517 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 SYT13Q7L8C5 426 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 SNX20Q7Z614 316 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 TSPAN33Q86UF1 283 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 CXorf40AQ8TE69 158 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 GANCQ8TET4 914 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 ALKBH8Q96BT7 664 aaKnown RBP13.65□□□□□ -0.22
VAPB-202ENST00000395802 SIPA1Q96FS4 1042 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 AGAP2Q99490 1192 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 RBBP8Q99708 897 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 RHOJQ9H4E5 214 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 LMAN1LQ9HAT1 526 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 LTB4R2Q9NPC1 389 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 IL1RAPL1Q9NZN1 696 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 NFKBIL1Q9UBC1 381 aaPredicted RBP13.65□□□□□ -0.22
VAPB-202ENST00000395802 FKBPLQ9UIM3 349 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 FZD4Q9ULV1 537 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
VAPB-202ENST00000395802 SHISA7A6NL88 538 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 A8MX80 341 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 SRP72O76094 671 aaKnown RBP13.64□□□□□ -0.23
VAPB-202ENST00000395802 PRAMEF1O95521 474 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 MT-ND3P03897 115 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 ITGA2BP08514 1039 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 SLC1A2P43004 574 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 CD151P48509 253 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 CNTN1Q12860 1018 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 TMEM52BQ4KMG9 183 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 ZRANB3Q5FWF4 1079 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 KIAA1211LQ6NV74 962 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 CYP2U1Q7Z449 544 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 CYP4X1Q8N118 509 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 SIX5Q8N196 739 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 HDDC3Q8N4P3 179 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 ULK4Q96C45 1275 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 SMIM14Q96QK8 99 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 SMC6Q96SB8 1091 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 MKRN2Q9H000 416 aaKnown RBP13.64□□□□□ -0.23
VAPB-202ENST00000395802 FAM83DQ9H4H8 585 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 FBXL12Q9NXK8 326 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 GGT7Q9UJ14 662 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 FAM170BA6NMN3 283 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 GOLGA8CPA6NN73 597 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 WNT9AO14904 365 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 NDUFS3O75489 264 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 RNASEH2AO75792 299 aaKnown RBP13.64□□□□□ -0.23
VAPB-202ENST00000395802 PIAS1O75925 651 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 PYGLP06737 847 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 BPIP17213 487 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 ATP1A2P50993 1020 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 LIMK2P53671 638 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 CTBP1Q13363 440 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 PTPRCAPQ14761 206 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 ZNF284Q2VY69 593 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.64□□□□□ -0.23
VAPB-202ENST00000395802 LIPIQ6XZB0 460 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 EID2BQ96D98 161 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 CABS1Q96KC9 395 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 IER2Q9BTL4 223 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 ZSCAN5AQ9BUG6 496 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 CCDC68Q9H2F9 335 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 KDM4CQ9H3R0 1056 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 ASB8Q9H765 288 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 SUDS3Q9H7L9 328 aaPredicted RBP13.64□□□□□ -0.23
VAPB-202ENST00000395802 IL26Q9NPH9 171 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 PSD3Q9NYI0 1048 aa13.64□□□□□ -0.23
VAPB-202ENST00000395802 STK25O00506 426 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 LZTS3O60299 673 aaPredicted RBP13.63□□□□□ -0.23
VAPB-202ENST00000395802 AHSGP02765 367 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 TARSP26639 723 aaKnown RBP13.63□□□□□ -0.23
VAPB-202ENST00000395802 DRD3P35462 400 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 LIG3P49916 1009 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 CLCN5P51795 746 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 SLC12A2P55011 1212 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 RALGDSQ12967 914 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 NFATC2Q13469 925 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 PEX6Q13608 980 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 ACOX1Q15067 660 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 TYSND1Q2T9J0 566 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 LRRC73Q5JTD7 316 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 PIP5KL1Q5T9C9 394 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 MROH9Q5TGP6 573 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 FAM151BQ6UXP7 276 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 TIFABQ6ZNK6 161 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 TAS2R42Q7RTR8 314 aa13.63□□□□□ -0.23
VAPB-202ENST00000395802 EXOC3L1Q86VI1 746 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms