RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CFHR5Q9BXR6 569 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 FBXO44Q9H4M3 255 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 ARNT2Q9HBZ2 717 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 CD300AQ9UGN4 299 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 USP22Q9UPT9 525 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 TIMM22Q9Y584 194 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 NCF1BA6NI72 391 aaPredicted RBP13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 NCF1CA8MVU1 366 aaPredicted RBP13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 GPR39O43194 453 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 AP1G1O43747 822 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 NRP2O60462 931 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 MTHFD2P13995 350 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 NCF1P14598 390 aaPredicted RBP13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 CD1DP15813 335 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 RENBPP51606 427 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 HK2P52789 917 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 BFSP2Q13515 415 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 ACAP2Q15057 778 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 GEN1Q17RS7 908 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 KIF19Q2TAC6 998 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 FUT10Q6P4F1 479 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 UMODL1-AS1Q8N2C9 162 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 ZBED2Q9BTP6 218 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 ZYG11BQ9C0D3 744 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 LIN28AQ9H9Z2 209 aaKnown RBP13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 MID1IP1Q9NPA3 183 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 FAM50BQ9Y247 325 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 TRIM17Q9Y577 477 aa13.47□□□□□ -0.25
GTF2F1-201ENST00000394456 SAC3D1A6NKF1 404 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 TBKBP1A7MCY6 615 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 H3BSA7 217 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 PDLIM1O00151 329 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 NME4O00746 187 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 VNN2O95498 520 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 GPX3P22352 226 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 ADSLP30566 484 aaPredicted RBP13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 GRIA3P42263 894 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 RGRP47804 291 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 VEGFBP49765 207 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 TAF10Q12962 218 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 BIRC2Q13490 618 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 IKBKEQ14164 716 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 KLC3Q6P597 504 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 LCA5Q86VQ0 697 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 DDIASQ8IXT1 998 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 GIPC2Q8TF65 315 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 BCL7CQ8WUZ0 217 aaPredicted RBP13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 TEX37Q96LM6 180 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 RPRD1AQ96P16 312 aaPredicted RBP13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 RANBP9Q96S59 729 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC30A3Q99726 388 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC2A11Q9BYW1 496 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 RAB26Q9ULW5 256 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 TLR6Q9Y2C9 796 aa13.46□□□□□ -0.25
GTF2F1-201ENST00000394456 MTMR11A4FU01 709 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 SOCS2O14508 198 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 AGTR2P50052 363 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 KCNQ1P51787 676 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 DIO3P55073 304 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 DUSP4Q13115 394 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 MRPL58Q14197 206 aaKnown RBP13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 C10orf120Q5SQS8 335 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 NADSYN1Q6IA69 706 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 KIAA0408Q6ZU52 694 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 SPAG4Q9NPE6 437 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 CROTQ9UKG9 612 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 SPO11Q9Y5K1 396 aa13.46□□□□□ -0.26
GTF2F1-201ENST00000394456 ANKRD12Q6UB98 2062 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SCAMP3O14828 347 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 FKTNO75072 461 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 MT-ND1P03886 318 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 C8BP07358 591 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 RBP1P09455 135 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 GNAO1P09471 354 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC2A3P11169 496 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 RHDQ02161 417 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 RBBP5Q15291 538 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC14A2Q15849 920 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SETMARQ53H47 684 aaPredicted RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SPPL2CQ8IUH8 684 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 CCDC117Q8IWD4 279 aaPredicted RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SEPT8Q92599 483 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 PPWD1Q96BP3 646 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 DEFB118Q96PH6 123 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 RBM38Q9H0Z9 239 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 MFSD1Q9H3U5 465 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 PIF1Q9H611 641 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SEMA4BQ9NPR2 832 aaPredicted RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 TMEM181Q9P2C4 612 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SUCOQ9UBS9 1254 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 ASB1Q9Y576 335 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms