RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 TIAL1Q01085 375 aaKnown RBP eCLIP13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 PPP4R4Q6NUP7 873 aa13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 RAB44Q7Z6P3 723 aaPredicted RBP13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 ANKFN1Q8N957 763 aa13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 ARRDC2Q8TBH0 407 aa13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 VPS33AQ96AX1 596 aa13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 SMOXQ9NWM0 555 aa13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 FAM50BQ9Y247 325 aa13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 NDUFAF1Q9Y375 327 aa13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 V9GYQ6 96 aa13.92□□□□□ -0.18
GAPVD1-205ENST00000394084 RNF103-CHMP3A0A140T963 221 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 NCF1BA6NI72 391 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 NCF1CA8MVU1 366 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 SUPT3HB4E1H0 165 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 SUPT3HO75486 399 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 NCF1P14598 390 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 NCK1P16333 377 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 THPOP40225 353 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 YWHAHQ04917 246 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 MAPRE1Q15691 268 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 FUT11Q495W5 492 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 BORAQ6PGQ7 559 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 EPHX4Q8IUS5 362 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 DNAJB14Q8TBM8 379 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 DUS3LQ96G46 650 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 GPATCH1Q9BRR8 931 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ANKRD60Q9BZ19 345 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 GMIPQ9P107 970 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ANKRD12Q6UB98 2062 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 M0QZQ0 153 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 FXYD1O00168 92 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 CRCPO75575 148 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 PENKP01210 267 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 MT-ND1P03886 318 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 MTHFD2P13995 350 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ACVRL1P37023 503 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ATP4BP51164 291 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 CLCN2P51788 898 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 LRRC49Q8IUZ0 686 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 TFAP2CQ92754 450 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 PIF1Q9H611 641 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 CLK4Q9HAZ1 481 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 CCM2LQ9NUG4 571 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 GALNT8Q9NY28 637 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 POLG2Q9UHN1 485 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ACTL7AQ9Y615 435 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 MUSKO15146 869 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 BMP2P12643 396 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ZNF37AP17032 561 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 RHOQP17081 205 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 EEF1DP29692 281 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ALDH3B2P48448 385 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 GALK1P51570 392 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 TUSC3Q13454 348 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 RABL3Q5HYI8 236 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 FBXL22Q6P050 247 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 CYGBQ8WWM9 190 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ADAM2Q99965 735 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 ARMC1Q9NVT9 282 aa13.91□□□□□ -0.18
GAPVD1-205ENST00000394084 GPR182O15218 404 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 INPP4BO15327 924 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 SOAT2O75908 522 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 BAIAP3O94812 1187 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 LBPP18428 481 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 SLC6A2P23975 617 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 INPP5AQ14642 412 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 TTC33Q6PID6 262 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 PHYKPLQ8IUZ5 450 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 ESAMQ96AP7 390 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 RPRD1AQ96P16 312 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 PRDM5Q9NQX1 630 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 IKZF3Q9UKT9 509 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 TLR6Q9Y2C9 796 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 BBIP1A8MTZ0 92 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 WASH4PA8MWX3 477 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 ARPC2O15144 300 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 IL10P22301 178 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 PSMA4P25789 261 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 FMO4P31512 558 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 POLD3Q15054 466 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 MRPL10Q7Z7H8 261 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 CLVS1Q8IUQ0 354 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 CMTR2Q8IYT2 770 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 GAB3Q8WWW8 586 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 LRRC58Q96CX6 371 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 FBXL20Q96IG2 436 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 HOPXQ9BPY8 73 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 OAZ3Q9UMX2 235 aa13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 FNDC3AQ9Y2H6 1198 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-205ENST00000394084 DLGAP1O14490 977 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 B4GALT3O60512 393 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 RHOBTB1O94844 696 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 CDK9P50750 372 aaKnown RBP13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 NFKB2Q00653 900 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 NFYCQ13952 458 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 SPRYD7Q5W111 196 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 KANK2Q63ZY3 851 aa13.89□□□□□ -0.19
GAPVD1-205ENST00000394084 MRNIPQ6NTE8 343 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms