RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MAMLD1Q13495 774 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 ZNF235Q14590 738 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 PTPRRQ15256 657 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 DCAF12Q5T6F0 453 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 ERMARDQ5T6L9 678 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 TMEM71Q6P5X7 295 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 DOK6Q6PKX4 331 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 Q6ZVL8 140 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 TSPAN33Q86UF1 283 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 ZNF761Q86XN6 746 aaPredicted RBP15.31■□□□□ 0.04
CHMP3-202ENST00000393773 FAM129CQ86XR2 697 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 LURAP1LQ8IV03 231 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 C9orf43Q8TAL5 461 aaPredicted RBP15.31■□□□□ 0.04
CHMP3-202ENST00000393773 ENOX1Q8TC92 643 aaKnown RBP15.31■□□□□ 0.04
CHMP3-202ENST00000393773 SLC37A2Q8TED4 501 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 RTP4Q96DX8 246 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 NUDCD1Q96RS6 583 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 NUP62CLQ9H1M0 184 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 PCSK1NQ9UHG2 260 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 ANAPC2Q9UJX6 822 aa15.31■□□□□ 0.04
CHMP3-202ENST00000393773 GOLGA6CA6NDK9 693 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 GOLGA6BA6NDN3 693 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 CAPN5O15484 640 aaPredicted RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 NKX2-8O15522 239 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 GOLGA6DP0CG33 693 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 OAS2P29728 719 aaKnown RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 HSPA9P38646 679 aaKnown RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 COPB1P53618 953 aaKnown RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 PEX6Q13608 980 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 IGFBP7Q16270 282 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 PPP6R3Q5H9R7 873 aaPredicted RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 PLEKHA7Q6IQ23 1121 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 ACAD10Q6JQN1 1059 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 TECPR1Q7Z6L1 1165 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 TRIM74Q86UV6 250 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 NLGN4XQ8N0W4 816 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 SFRP1Q8N474 314 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 NLGN4YQ8NFZ3 816 aaPredicted RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 NEK11Q8NG66 645 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 FNIP1Q8TF40 1166 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 PDCD6IPQ8WUM4 868 aaKnown RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 TEFMQ96QE5 360 aaKnown RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 TRIM7Q9C029 511 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 NOD2Q9HC29 1040 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 GOLGA6AQ9NYA3 693 aa15.3■□□□□ 0.04
CHMP3-202ENST00000393773 CWC15Q9P013 229 aaKnown RBP15.3■□□□□ 0.04
CHMP3-202ENST00000393773 A0A0U1RQS6 177 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 LOC101059948A0A1B0GTJ6 334 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 LGALS16A8MUM7 142 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 DAPK3O43293 454 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 PGLSO95336 258 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 EML2O95834 649 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 NTRK1P04629 796 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 PRKAR1AP10644 381 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 CYP2A6P11509 494 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-202ENST00000393773 GP1BBP13224 206 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 MIPP30301 263 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 PYCR3Q53H96 274 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 ADAMTSL4Q6UY14 1074 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 RFLNAQ6ZTI6 216 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 TIPARPQ7Z3E1 657 aaKnown RBP15.29■□□□□ 0.04
CHMP3-202ENST00000393773 PSTKQ8IV42 348 aaKnown RBP15.29■□□□□ 0.04
CHMP3-202ENST00000393773 SCRN2Q96FV2 425 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 ZMYND15Q9H091 742 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 GPN2Q9H9Y4 310 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-202ENST00000393773 CD84Q9UIB8 345 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 PHTF1Q9UMS5 762 aa15.29■□□□□ 0.04
CHMP3-202ENST00000393773 PCYT1BQ9Y5K3 369 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-202ENST00000393773 LRCH4O75427 683 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 MAP3K6O95382 1288 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 TPM2P07951 284 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 NFKBIAP25963 317 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 GPR1P46091 355 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 HCAR3P49019 387 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 ZNF135P52742 658 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-202ENST00000393773 MAXP61244 160 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 MC2RQ01718 297 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 WDR74Q6RFH5 385 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-202ENST00000393773 USP45Q70EL2 814 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 ARHGAP22Q7Z5H3 698 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 NRSN1Q8IZ57 195 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 UNC5BQ8IZJ1 945 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 LZTR1Q8N653 840 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 STARD8Q92502 1023 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 KIAA1143Q96AT1 154 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-202ENST00000393773 ERGIC2Q96RQ1 377 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 CTRCQ99895 268 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 ZNF71Q9NQZ8 489 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-202ENST00000393773 PARVAQ9NVD7 372 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 ETNK2Q9NVF9 386 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 FANCLQ9NW38 375 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 TMEM98Q9Y2Y6 226 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 PPIL1Q9Y3C6 166 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 TMEM184BQ9Y519 407 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-202ENST00000393773 ICE1Q9Y2F5 2266 aa15.28■□□□□ 0.04
CHMP3-202ENST00000393773 PRRC2CQ9Y520 2896 aaKnown RBP15.27■□□□□ 0.04
CHMP3-202ENST00000393773 TMEM191CA6NGB0 347 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 PRPSAP2O60256 369 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 MAFKO60675 156 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms