RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 C1QTNF3-AMACRE9PGA6 284 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 IGSF6O95976 241 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 PRNPP04156 253 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 STIP1P31948 543 aaKnown RBP20.52■□□□□ 0.88
SYNC-201ENST00000373484 NR2C2P49116 596 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 FAM46CQ5VWP2 391 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 TIGD7Q6NT04 549 aaPredicted RBP20.52■□□□□ 0.88
SYNC-201ENST00000373484 SH2D5Q6ZV89 423 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 USP30Q70CQ3 517 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 C11orf74Q86VG3 221 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 FBXO36Q8NEA4 188 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 CINPQ9BW66 212 aaPredicted RBP20.52■□□□□ 0.88
SYNC-201ENST00000373484 KCNK13Q9HB14 408 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 ARL8BQ9NVJ2 186 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 SEPT3Q9UH03 358 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 ZNF180Q9UJW8 692 aa20.52■□□□□ 0.88
SYNC-201ENST00000373484 PSMG1O95456 288 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 IFNB1P01574 187 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 BCKDHBP21953 392 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 RPL22P35268 128 aaKnown RBP20.51■□□□□ 0.87
SYNC-201ENST00000373484 METAP1P53582 386 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 MXRA7P84157 204 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 PPIDQ08752 370 aaKnown RBP20.51■□□□□ 0.87
SYNC-201ENST00000373484 SIM2Q14190 667 aaPredicted RBP20.51■□□□□ 0.87
SYNC-201ENST00000373484 DBN1Q16643 649 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 CEP68Q76N32 757 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 AADATQ8N5Z0 425 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 OR6K2Q8NGY2 324 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 ACTL9Q8TC94 416 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 GRIN3AQ8TCU5 1115 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 STMN2Q93045 179 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 VOPP1Q96AW1 172 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 EXOC2Q96KP1 924 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 C7orf26Q96N11 449 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 PSKH2Q96QS6 385 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 TSC22D3Q99576 134 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 ZDHHC6Q9H6R6 413 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 SCOCQ9UIL1 159 aa20.51■□□□□ 0.87
SYNC-201ENST00000373484 LEFTY1O75610 366 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 POP4O95707 220 aaKnown RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 ESRRAP11474 423 aaPredicted RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 OXTRP30559 389 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 SSTR1P30872 391 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 OTUD4Q01804 1114 aaKnown RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 ZNF33AQ06730 810 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 SFSWAPQ12872 951 aaKnown RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 HNRNPDQ14103 355 aaKnown RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 KPNB1Q14974 876 aaKnown RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 PDK1Q15118 436 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 MYLK3Q32MK0 819 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 ARSIQ5FYB1 569 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 FNBP1LQ5T0N5 605 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 SLC30A9Q6PML9 568 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 LRRC74BQ6ZQY2 392 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 KBTBD6Q86V97 674 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 ANKMY2Q8IV38 441 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 RYBPQ8N488 228 aaPredicted RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 TEX26Q8N6G2 289 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 LRRN4Q8WUT4 740 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 LRIG1Q96JA1 1093 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 NR1H4Q96RI1 486 aaPredicted RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 LGMNQ99538 433 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 TMEM120AQ9BXJ8 343 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 FAM192AQ9GZU8 254 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 FBXL12Q9NXK8 326 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 WSB2Q9NYS7 404 aaPredicted RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 SAE1Q9UBE0 346 aaPredicted RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 SERGEFQ9UGK8 458 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 ANGPTL2Q9UKU9 493 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 IKBKGQ9Y6K9 419 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 A0A1W2PP55 124 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 PROB1E7EW31 1015 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 APOC4-APOC2K7ER74 178 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 RNF103O00237 685 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 MUSKO15146 869 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 MATN3O15232 486 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 APOC2P02655 101 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 CD6P30203 668 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 DRD3P35462 400 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 RGRP47804 291 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 NSUN2Q08J23 767 aaKnown RBP eCLIP20.5■□□□□ 0.87
SYNC-201ENST00000373484 ZNF235Q14590 738 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 RCN1Q15293 331 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 MARC1Q5VT66 337 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 SLC36A4Q6YBV0 504 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 CCNYQ8ND76 341 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 ZC3H10Q96K80 434 aaKnown RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 TAS2R1Q9NYW7 299 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 EVLQ9UI08 416 aaPredicted RBP20.5■□□□□ 0.87
SYNC-201ENST00000373484 DCTN4Q9UJW0 460 aa20.5■□□□□ 0.87
SYNC-201ENST00000373484 A0A0G2JND7 137 aa20.49■□□□□ 0.87
SYNC-201ENST00000373484 CFAP69A5D8W1 941 aa20.49■□□□□ 0.87
SYNC-201ENST00000373484 MAGEA13PA6NCF6 341 aa20.49■□□□□ 0.87
SYNC-201ENST00000373484 GKP32189 559 aa20.49■□□□□ 0.87
SYNC-201ENST00000373484 CSNK1DP48730 415 aa20.49■□□□□ 0.87
SYNC-201ENST00000373484 RENBPP51606 427 aa20.49■□□□□ 0.87
SYNC-201ENST00000373484 ROR2Q01974 943 aaKnown RBP20.49■□□□□ 0.87
SYNC-201ENST00000373484 RAD51Q06609 339 aa20.49■□□□□ 0.87
SYNC-201ENST00000373484 PLK5Q496M5 336 aa20.49■□□□□ 0.87
SYNC-201ENST00000373484 MSS51Q4VC12 460 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms