RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CDCA3Q99618 268 aaPredicted RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 PRMT1Q99873 361 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 ZNF670Q9BS34 389 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 LRRC1Q9BTT6 524 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CENPOQ9BU64 300 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 KLC2Q9H0B6 622 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MYLK2Q9H1R3 596 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 LRRC19Q9H756 370 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 C10orf88Q9H8K7 445 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 TNFRSF12AQ9NP84 129 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ASAH2Q9NR71 780 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ZC3H12DA2A288 527 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 DRGXA6NNA5 263 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CCDC188H7C350 402 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 TRDMT1O14717 391 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 RAD51CO43502 376 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ACSL4O60488 711 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 PHF2O75151 1096 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CNTN5O94779 1100 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 TJP3O95049 919 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 APOEP02649 317 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 RHOXF2BP0C7M4 288 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SRGAP2BP0DMP2 458 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SLC2A3P11169 496 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CEBPBP17676 345 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ERCC2P18074 760 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 PAMP19021 973 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 FPR2P25090 351 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CDC25CP30307 473 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 HOXC13P31276 330 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SLC6A4P31645 630 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CETN2P41208 172 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CCT5P48643 541 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MANFP55145 182 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 YBX1P67809 324 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 COG7P83436 770 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 OTUD4Q01804 1114 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 GBE1Q04446 702 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 DLX2Q07687 328 aaPredicted RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 LSAMPQ13449 338 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 TFDP2Q14188 446 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SLC9A5Q14940 896 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 TRADDQ15628 312 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 OASLQ15646 514 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 C3orf36Q3SXR2 165 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ARL13BQ3SXY8 428 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ODF2Q5BJF6 829 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 FAM133BQ5BKY9 247 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 FAM209BQ5JX69 171 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 TEX35Q5T0J7 233 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 RARS2Q5T160 578 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 RAP1GAP2Q684P5 730 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 NCBP2-AS2Q69YL0 99 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ANKRD54Q6NXT1 300 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 FBXL22Q6P050 247 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 RFWD3Q6PCD5 774 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CYP2R1Q6VVX0 501 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 C1orf122Q6ZSJ8 110 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 RFX8Q6ZV50 586 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 TADA2BQ86TJ2 420 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 PRUNE1Q86TP1 453 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CCDC33Q8N5R6 958 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ATP6V0D2Q8N8Y2 350 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SLC35B2Q8TB61 432 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MZB1Q8WU39 189 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ING5Q8WYH8 240 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 SMG7Q92540 1137 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 NUP205Q92621 2012 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MRPS31Q92665 395 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 RPGRIP1Q96KN7 1286 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 BTN2A3PQ96KV6 586 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 C16orf92Q96LL3 132 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 RHOXF2Q9BQY4 288 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MAK16Q9BXY0 300 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 CD244Q9BZW8 370 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 NACA2Q9H009 215 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 YY1AP1Q9H869 796 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ANKZF1Q9H8Y5 726 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CLDND1Q9NY35 253 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MPP6Q9NZW5 540 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 RCOR3Q9P2K3 495 aaPredicted RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 GULP1Q9UBP9 304 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 ZNF212Q9UDV6 495 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 AMACRQ9UHK6 382 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 AGO1Q9UL18 857 aaKnown RBP3.62□□□□□ -1.83
MCF2-202ENST00000370573 DNPEPQ9ULA0 475 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CCL26Q9Y258 94 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 PCDHGB2Q9Y5G2 931 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 B3GALT1Q9Y5Z6 326 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 CPQQ9Y646 472 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 MTCH2Q9Y6C9 303 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 C5orf42Q9H799 3197 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 C2orf16Q68DN1 1984 aa3.62□□□□□ -1.83
MCF2-202ENST00000370573 IGLV3-10A0A075B6K4 115 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TRAV19A0A0A6YYK7 116 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 A0A1W2PPC1 479 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 A6NCN8 305 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 E9PAM4 449 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 APOC4-APOC2K7ER74 178 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms