RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 BTF3P20290 206 aaKnown RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 IL32P24001 234 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 PKLRP30613 574 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 NSFP46459 744 aaKnown RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 STT3AP46977 705 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 AQP4P55087 323 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 NPTX1Q15818 432 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF699Q32M78 642 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 C6orf10Q5SRN2 563 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 PGM2L1Q6PCE3 622 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 TUBA3EQ6PEY2 450 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CARNMT1Q8N4J0 409 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 TNIP2Q8NFZ5 429 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF606Q8WXB4 792 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CPA5Q8WXQ8 436 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CD101Q93033 1021 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 Q9H521 79 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CCDC177Q9NQR7 707 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 SUCOQ9UBS9 1254 aaKnown RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 TSPAN16Q9UKR8 245 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 FAM47DPA6NHR8 397 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 DDX3YO15523 660 aaKnown RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 HRO43593 1189 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 NDUFA2O43678 99 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 PGM3O95394 542 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 LSM8O95777 96 aaKnown RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 TNNC2P02585 160 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CYP1A2P05177 515 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 RBP3P10745 1247 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 GJA1P17302 382 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 TCEA1P23193 301 aaKnown RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CAMK2GQ13555 558 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 PDGFRLQ15198 375 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 SHBQ15464 509 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CDKN3Q16667 212 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF658BQ4V348 819 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 PLEKHA7Q6IQ23 1121 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 NT5DC3Q86UY8 548 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 PIGZQ86VD9 579 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 C1orf210Q8IVY1 113 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 TPCN2Q8NHX9 752 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 BTBD6Q96KE9 485 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 CIB1Q99828 191 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 C11orf70Q9BRQ4 267 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 NT5C1AQ9BXI3 368 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 ASAH2Q9NR71 780 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 SENP1Q9P0U3 644 aa6.89□□□□□ -1.31
CSDE1-204ENST00000369530 SMG5Q9UPR3 1016 aaKnown RBP6.89□□□□□ -1.31
CSDE1-204ENST00000369530 A0A1W2PQH9 124 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF487B1APH4 448 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 H3BSA7 217 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ICMTO60725 284 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SPAG7O75391 227 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 GCATO75600 419 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 FGGP02679 453 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ADSLP30566 484 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 BST2Q10589 180 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TAF10Q12962 218 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SELENBP1Q13228 472 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 C16orf72Q14CZ0 275 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 DENND5BQ6ZUT9 1274 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ACOT1Q86TX2 421 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 ZNF677Q86XU0 584 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 JAMLQ86YT9 394 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 UBL4BQ8N7F7 174 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 FBXO25Q8TCJ0 367 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 HM13Q8TCT9 377 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 RFFLQ8WZ73 363 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SMG9Q9H0W8 520 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 PPCSQ9HAB8 311 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 THAP10Q9P2Z0 257 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 MTO1Q9Y2Z2 717 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 MAD1L1Q9Y6D9 718 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 C2CD4BA6NLJ0 364 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 OR5K4A6NMS3 321 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SYCE1LA8MT33 242 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TRIM77I1YAP6 450 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 HAUS5O94927 633 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 GIMD1P0DJR0 217 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 BRAFP15056 766 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CREB1P16220 341 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 PRKCAP17252 672 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CD9P21926 228 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 GABRB3P28472 473 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TXNL4AP83876 142 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CDC20Q12834 499 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 COX10Q12887 443 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 TRAP1Q12931 704 aaKnown RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 RUNX3Q13761 415 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 LRRC14Q15048 493 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 STILQ15468 1287 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 HP1BP3Q5SSJ5 553 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SEL1L2Q5TEA6 688 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SDHAF4Q5VUM1 108 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SYPL2Q5VXT5 272 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 DCUN1D2Q6PH85 259 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 SPEM1Q8N4L4 309 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 CCDC89Q8N998 374 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 PDPRQ8NCN5 879 aa6.88□□□□□ -1.31
CSDE1-204ENST00000369530 BRSK1Q8TDC3 778 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms